Sorghum bicolor (sorghum): 110432900
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Entry
110432900 CDS
T01086
Name
(RefSeq) DSC E3 ubiquitin ligase complex subunit 1-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
110432900
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110432900
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110432900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf-RING_UBOX
Prok-RING_4
zf_RING_Vps8
zf-RING_Vps41
DUF2921
zf_RING_Vps8_fungal
PHD_NSD
IBR_1
Motif
Other DBs
NCBI-GeneID:
110432900
NCBI-ProteinID:
XP_021309726
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All DBs
Position
2:complement(68487230..68493557)
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AA seq
569 aa
AA seq
DB search
MGPAAGSGVVIRAAAVGLVLVGIALAPPLAAALRPLRERVASVGAAASAGSWGDEHAFFK
RDENDIGPYSWNITGTYKGSWTFAGATNGSSRFLEFVESKGDSVLELLSTPTKISGVHYV
QGSITFHDVIDNAHDGGVAQIRLEGVYIWPFRQLRMVANSGADGEPLQEEDYFLSNPYHL
LRIFSSQVFQESSEEKNQRKNSLTYDMEKHCNTEIAAKVVRVSSNPNDGEHEKYRLEGLV
ESPAVDDDGECFSPILLNATSLNVEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQS
GAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAI
WKASRPLNSGEGWEIMRRELSVLYSRFYGILLGGILLMYELHNFLRPLLLLMYSFWVPQI
ITNVIRDTRKPLHPQYILGMTVTRLAIPLYIFGCPNNFMRIEPDKKWCIAVTVFMGIQAA
VLLLQHYLGSRCFIPRQILPEKYCYHRKVEDNTNQPIDCVICMTTIDLTQRTSEYMVAPC
EHIFHSGCLQRWMDIKMECPTCRRSLPPA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgccgccggaagcggcgtcgtgatcagggccgctgcggtggggctcgtgctg
gtcggcatcgccctggccccgccgctggccgcggcgctgcggccgctccgggagcgcgtc
gcgtccgtcggagccgccgcctccgccggttcgtggggcgatgagcatgccttcttcaaa
agggatgagaacgatataggcccgtattcttggaatattacgggaacgtataaagggagc
tggacctttgctggtgccacaaatggttcgtctaggtttcttgagtttgtggaatctaaa
ggtgattcagttcttgaattgttgagcactccaacaaagataagcggggtgcattatgtt
cagggttcaattacattccatgatgtcattgacaatgcccatgatggtggagtggctcaa
ataaggttagaaggagtgtacatatggccttttagacaactccgcatggtagcgaacagt
ggtgcagatggtgaacctcttcaggaagaggattactttttgtcaaatccataccatttg
ctgcggattttctcctctcaagtgttccaagaatcttctgaagagaagaaccaaaggaag
aattctctcacatatgacatggagaaacattgcaacacagaaatagctgctaaggttgtt
cgtgtgtcatctaacccaaatgatggagaacacgagaagtaccgtttggagggtttggtg
gagagtccagctgttgatgatgacggggaatgcttctctcctatcttattgaatgcaact
tctttgaatgttgaagtttattacaacaaagcagtcaactacacactgatggtcactttt
atctctttccttcaagttttgctgctgattagacaaatggagcatagcaacactcaatcc
ggagctgctaaggtttctattttaatgattggccaacaagctatcatggatgcatatctc
tgtctacttcacctgactgctgggatattggttgagtcactctttaatgccttcgcaacg
gctgcattcttcaaatttgttgtattttctatttttgaaatgaggtaccttcttgccata
tggaaagcaagtaggcctttaaacagtggagaaggttgggagataatgaggcgagagctg
tcggttctttacagccgcttttatggcattcttttgggaggaatccttctaatgtatgag
ctgcacaattttttacgcccacttcttctcctgatgtactccttttgggtacctcaaatt
atcacaaatgtcatcagggacacaagaaaacctctgcacccgcaatatattttaggcatg
acagttacccgccttgctattccactgtacatatttggttgccctaacaacttcatgcgc
atcgaacccgacaagaaatggtgcatagctgttacagtattcatgggtatccaagcagca
gtgcttctgcttcagcactatcttggttctcgctgctttattcctcgccagatactgcct
gagaaatactgctaccacaggaaggtagaggataacacaaatcagcccattgattgtgtt
atttgcatgactacaattgaccttacccaaagaacaagtgaatacatggtggcaccttgc
gagcatatatttcactcaggctgtttacagcgttggatggacatcaagatggagtgccca
acttgcaggcgctccctaccgccagcttag
DBGET
integrated database retrieval system
