Sorghum bicolor (sorghum): 110432902
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Entry
110432902 CDS
T01086
Name
(RefSeq) isoamylase 3, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00500
Starch and sucrose metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
110432902
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
110432902
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
DUF5696
Motif
Other DBs
NCBI-GeneID:
110432902
NCBI-ProteinID:
XP_021309730
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Position
2:complement(62457134..62468201)
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AA seq
776 aa
AA seq
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MDSVGTNRPPLRSVAAAVTRRSALLCPPRHLGLGNRFAETKLGIASGCGGGGYFGKVQRF
NALRNTTTKVQSGKAGSSVTKEMGHTSSGSEVPLKYSSGKAFPLGVSQVDDGLNFAIFSQ
HASSVTLCLKLHERGTQDDADIVEFPLDRQKNKTGDIWHVSVEGLPASGVLYGYRINGPQ
GWQQGHRFDDSVILLDPYAKLVSGRKHFAVEEEKPSQLFGTYDFDSSPFDWGDNYRLPNL
PETDLVIYEMNVRAFTADESSRLGPAFRGSYLGVIDKIPHLLELGVNAVELLPVFEFDEL
ELKRFPNPRDHMVNTWGYSTINFFAPMSRYASAGGGPVAASKELKQMVKAFHNAGIEVIL
DVVYNHTNEADDANPYVTSFRGIDNKVYYMLDLNNNAQLLNFSGCGNTLNCNHPVVKELV
LDSLRHWVTEYHIDGFRFDLASVLCRGPDGSPLDAPPLIKEIAKDSVLSRCKIIAEPWDC
GGLYLVGKFPNWDRWAEWNGKYRDDIRRFIKGDPGMKGVFATRVSGSADLYQVNNRKPYH
SVNFVIAHDGFTLCDLVSYNSKHNDANGEGGRDGCNDNDSWNCGIEGETNDLNVLSIRSR
QMKNFHVALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTHINNFQWGQLEERKDGHFRFF
SEMIKFRRNHPILRRDRFLNKNDITWHENNWENQDSKFLAFTIHDHNSGGDIYLAFNAHE
YFVDAVIPPPPQHKSWSRVVDTNLESPKDIVPEGVPFTGSGYRIAPYSSILLKAKP
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtcggtacaaatcggcccccgctgcgctccgttgctgccgcagtcactcga
cgcagcgcgctcctgtgtccgcctcgccacctcgggctcggcaatcgttttgcggagact
aagcttgggatcgcgtctgggtgtggaggaggagggtattttggaaaggtacagcgattt
aacgccttgcggaataccactacgaaagttcagagcgggaaggcggggtcaagtgtgacc
aaggaaatgggacacacctcatctggcagtgaagtgcccttgaaatattcttcaggcaaa
gctttccctctaggagtgtcacaagttgacgatgggctaaattttgcaatattctcacag
catgcttcttctgtcaccctttgcttgaaacttcatgagagaggcacccaagatgatgca
gacattgtagagtttcctttagaccgccaaaagaacaaaactggagatatatggcatgtg
tcggtggagggtttgcctgcttctggtgttctttatgggtatcgcattaatggtcctcaa
gggtggcaacaaggtcatagatttgatgacagcgttattcttctggacccttatgcaaaa
ttagtttctggccgtaagcactttgcggttgaagaagagaaaccaagccagcttttcgga
acatatgattttgatagctcaccttttgactggggtgacaattataggcttcctaatttg
cctgagacagatcttgttatatatgaaatgaatgtccgtgccttcactgcggatgagtca
agcaggcttggtccagcttttcgtggaagttaccttggtgtcattgataaaattcctcat
ttgctggaacttggcgttaatgcagtggaactacttcctgtttttgagtttgatgagctg
gagttgaagaggttccctaacccaagggaccacatggtaaatacatggggatattctaca
atcaacttttttgcgcccatgagtcgttatgctagtgcgggtggtggacctgtggctgct
tccaaagagctcaaacagatggtcaaggcatttcataatgctggaattgaggttattctg
gatgtggtttacaaccatacaaatgaagcagatgatgctaacccttatgtgacttccttt
cgtggcattgataacaaggtctattacatgttagatctcaacaacaatgctcagctgctg
aacttctcgggttgcgggaatacactaaactgcaaccaccctgttgtcaaggagcttgta
ctcgacagtttgagacattgggttacggagtatcacatagatggatttcggtttgacctt
gcaagtgttctttgtcgtggaccagatggcagtcctcttgatgcacctccactcattaag
gaaattgccaaagactctgtattgtctagatgtaagatcattgctgaaccttgggactgt
ggtggcctttatctagtagggaagttccctaattgggacaggtgggctgaatggaacggg
aagtacagagatgatattcgaagatttattaagggagatcctggtatgaagggggtgttt
gcaactcgtgtttctggttctgcagatctctaccaggtgaacaatcggaagccttaccat
agtgtgaactttgtaattgctcatgatggatttactttatgtgaccttgtttcatataac
tccaagcacaatgatgcgaatggagaaggtggtcgtgatgggtgcaatgacaacgacagc
tggaactgtggcattgaaggagaaacaaatgatttgaatgtgctaagtattcgttcaagg
caaatgaagaactttcatgtggcattaatgatttcccagggtactccaatgatgctgatg
ggagacgaatatggtcacacacgttatggaaacaacaacagctatggacatgatactcac
ataaataattttcagtggggccagttggaagaaagaaaggatggccatttcaggtttttc
tcagagatgatcaagtttcggcgtaaccatcctatactgagacgagacaggtttctcaat
aaaaatgatatcacctggcatgaaaataattgggagaaccaggacagcaaatttttggca
ttcacgatacatgatcacaattctggtggagatatctatttggcattcaatgctcatgag
tattttgtggatgctgtaattcccccaccaccacagcataaatcttggagtcgtgtggtg
gataccaacctggaatcaccaaaggatattgtcccagaaggggtgccattcacaggttca
gggtacaggattgctccctactcttccatcttgcttaaggcaaagccttag
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