Sorghum bicolor (sorghum): 110432948
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Entry
110432948 CDS
T01086
Name
(RefSeq) probable ubiquitin receptor RAD23
KO
K10839
UV excision repair protein RAD23
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03420
Nucleotide excision repair
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110432948
09124 Replication and repair
03420 Nucleotide excision repair
110432948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sbi03051
]
110432948
03400 DNA repair and recombination proteins [BR:
sbi03400
]
110432948
Proteasome [BR:
sbi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110432948
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110432948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Crinkler
UBA_RAD5A
CUE
UBX
Dsc3_N
Ubiquitin_4
UBL_UBAC1
Ubiquitin_5
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
110432948
NCBI-ProteinID:
XP_021309926
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Position
2:58647742..58654715
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AA seq
391 aa
AA seq
DB search
MKVSVKTLKGSSFQIEVEPTDKVADVKKVIESIQENASYPADQQVLIHQGKVLKDDTTLE
ENQVVENNFLVIMLRQNKGSSSAAPAKATANQAPPTQTVPATPTQMSAAPAAPAPIVPVS
APAATATALAAPAVAVSTEADSYGQAASNLVAGSNLEGTIQSILEMGGGTWDRDTVLRAL
RAAYNNPERAVEYLYSGIPEQMEAPAPPPSSQPANPVQAAQTAQAVVPSSGPNANPLDLF
PQSLPNASANAGAGNLDVLRNNAQFQNLLGLVQANPQILQPLLQELGKQNPQVMQLIQEN
QAEFMRLINEPLEGDEENEMMLDQMADAAETIAVTPEENEAILRLEGMGFDRALVLEVFF
ACNKNEQLAANYLLDHMHEFDNDDGLGGPPL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttccgtgaagacgctcaagggatccagcttccagatcgaagtggaacccacc
gacaaggttgctgatgtgaaaaaggtcatagagagtatacaagaaaatgcttcctatcct
gctgaccaacaagtgcttatacaccaggggaaggtgctcaaggatgacaccacattggag
gaaaaccaagtggttgagaataattttcttgttataatgctcagacagaacaagggatca
tcaagtgcagcaccagctaaggcaaccgcaaatcaggctccccctactcagacagtgcct
gctactccaactcaaatgtcagcagccccagctgcaccggcacctattgtacctgtcagt
gcaccggctgcaactgctacagccttggcagctcctgctgttgctgtatccactgaggca
gatagttatggtcaggctgcctcaaacctagttgctggcagcaacttggaaggaacaatt
caatccattcttgaaatgggtggcgggacatgggacagagacactgtactacgtgctctg
cgggctgcctataacaatccagagcgtgctgttgagtacttatattctgggattcctgaa
caaatggaagctcctgcaccacctccaagttcccagccagccaatcctgtccaggcggca
caaacagctcaagctgtagttccttcatctggaccaaatgctaaccctctcgacctcttt
ccccaatctcttccgaatgcttccgctaatgccggcgcagggaaccttgatgttttgcgt
aataacgcccaattccaaaacctgcttggtttggtgcaggctaaccctcagattttgcag
ccattgcttcaagaattggggaaacaaaatccccaggttatgcagctaatccaggaaaac
caagcagaattcatgcggttgatcaatgaaccactggagggagatgaagagaatgaaatg
atgctggaccagatggcggatgcagctgagaccattgcagtcactccagaggagaacgaa
gctatacttcgtcttgaagggatgggctttgaccgggcacttgtcctggaagtgtttttc
gcctgcaacaagaacgagcagctggccgccaactacctcttggatcacatgcacgagttc
gacaacgatgacgggctcggagggccaccactatga
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