Sorghum bicolor (sorghum): 110433415
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Entry
110433415 CDS
T01086
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00280
Valine, leucine and isoleucine degradation
sbi00650
Butanoate metabolism
sbi01100
Metabolic pathways
sbi04146
Peroxisome
Module
sbi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
110433415
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
110433415
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110433415
Enzymes [BR:
sbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
110433415
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
110433415
NCBI-ProteinID:
XP_021311174
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Position
3:complement(11602014..11607257)
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AA seq
438 aa
AA seq
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MLAASTKVGSRLASPHASSSASAAAAVATALASSPVLGSGSGVLSGAGFGETGSHHAADA
PPPCSSSGDSREYCQWKRLVNQRQSTLQGGKVTAALGDHVSGARCSSWSQHINRYFSSSS
HQGRIWAGSKVLHDLPQYVKIVEVGPRDGLQNEKDIVPTPVKVELIRRLATSGLPVVEAT
SFVSPKWVPQLADAKDVMEAVRIIEGVRLPVLTPNLKGFEAAIAAGAKEIAIFASASEGF
SKSNINCTIKESIARYNDVALAAKEKEIPVRGYVSCVVGCPVDGPVPPSNVAYVAKELYD
MGCYEVSLGDTIGVGTPGTVAPMLEAAMSVVPVEKLAVHFHDTYGQSLSNILISLQMGVN
VVDSSVAGLGGCPYAKGASGNVATEDVVYMLKGLGIKTGVDLGKVMAAGEFICKHLGRQS
GSKAATALSKVTANASKL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggcgtccaccaaggtcggctctaggctggcctctccgcacgcctcctcgtcc
gccagtgctgctgctgctgtggcgacggcgctggcgagctcccccgtgctgggctctggg
tctggggtgctctcaggcgccgggttcggcgagacggggagtcatcacgcggcggacgcg
ccgccgccttgcagttcctcgggcgattcaagggaatattgtcagtggaagagactggtg
aatcaaaggcagtcaacgctacaaggaggcaaagtgactgctgcattgggcgatcatgtt
tctggcgcacgctgttcctcgtggagtcaacatattaacagatacttttcatcttcttct
catcaagggaggatatgggccgggagcaaggttctacatgacctgccacagtatgtaaaa
attgtggaagtagggccacgggatggtttacagaatgaaaaggacattgtaccaacacct
gtaaaggttgagcttatacgaagattggccacatccggattacctgtggtggaggcaaca
agttttgtatctccaaaatgggtacctcagttagctgatgcgaaggatgttatggaagca
gttcggattattgagggtgtgcgtcttcctgtattgaccccaaaccttaagggatttgag
gcagctattgcagcaggggcaaaagaaatcgcaatatttgcatcagcttctgaaggattt
tccaagtcaaacataaactgcaccatcaaagagagcattgcccgttataatgatgttgct
cttgctgcaaaagagaaagaaattcctgtccgagggtatgtgtcttgtgtggttggatgc
ccagtagatggaccagtaccaccttcaaacgtagcttatgtagcgaaagaactttatgac
atgggctgctatgaagtttcacttggtgataccattggagtcggtactccaggtaccgtg
gctccaatgcttgaggcagccatgtccgtcgttcccgtggagaagcttgctgtccacttc
cacgacacctacggccagtccctctcaaatattctcatctctctccagatgggagtcaac
gttgtggactcctctgtcgctggcctcggtggctgcccgtacgcaaagggtgcgtcaggg
aacgtggcgacggaggatgtagtgtacatgctcaaagggctgggcatcaagacgggcgtc
gacctgggcaaggtgatggccgccggcgagtttatctgcaagcacctgggacgccagtct
gggtccaaggcagcgaccgctctgagcaaagttactgcaaacgcctcgaaactctga
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