Sorghum bicolor (sorghum): 110433853
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Entry
110433853 CDS
T01086
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
110433853
03036 Chromosome and associated proteins [BR:
sbi03036
]
110433853
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110433853
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110433853
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
110433853
microRNA pathway
RISC loading complex
110433853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
110433853
NCBI-ProteinID:
XP_021312391
LinkDB
All DBs
Position
3:complement(12109427..12117322)
Genome browser
AA seq
900 aa
AA seq
DB search
MESHNGEADDLPPPPPLNAGVEPLKADETKVPLKHRTLVQRNGFGRKGQQIKLLTNHFKV
SLMNAADYFYHYYVNLKYEDDTPVDRKGSGRKVIEKLQQTYAAELANKDFAYDGEKSLFT
IGALPQVKNEFTVVVDDVSTGKTPANGSPGNDSPPGSDRKRIRRPYNTKTYKVELSFAAR
IPMSAISQALRGQESEHTQEAIRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGV
VGCRGFHSSFRATQSGLSLNIDVSTTMIVKPGPVIDFLLANQKVNHPGMIDWAKAKRSLK
NLRIKTSPANQEQKIVGLSDRPCCEQLFTLKHKNGNGDSEEITVYDYFVKNRGIELQYSG
DLPCINVGKPKRPTYFPVELCSLLPLQRYTKALSTLQRSSLVEKSRQKPQERIGVLSDVL
QRSNYDAEPMLKACGITIARSFTEVDGRILQPPKLKAGNGEDIFTRNGRWNFNNKRLIKG
SSVEKWAVVNFSARCNVRDLVRDLIKCGGMKGIMVEAPFDVFEENPSMRRSPAVRRVEDM
FEQVKTKLPGAPKFLLCVLAERKNSDIYGPWKKKCLAEFGIVTQCVAPTRVNDQYLTNVL
LKINAKLGGMNSLLQIETSPAIPQVSKVPTIILGMDVSHGSPGHSDVPSIAAVVSSREWP
LISKYRASVRTQSPKMEMIDSLFKPRETEDDGLIRECLIDFYTSSGKKKPDQVIIFRDGV
SESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKTENVPAGTVVD
NKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAI
SVVAPICYAHLAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcacaatggcgaggctgatgacttgcctccaccacctcctttgaatgctggt
gttgaaccacttaaagctgatgaaacaaaggtgccattgaaacataggactctggtccag
aggaatggctttggcagaaaggggcagcagataaaactgctaacaaatcacttcaaagtt
tctctcatgaatgctgcagattatttctatcattactacgtcaacttgaagtatgaagat
gatacaccggttgatcgcaaagggtcgggaagaaaagttatagaaaaactgcagcagact
tatgctgctgaacttgcaaataaagattttgcatatgatggtgagaagagcctgttcaca
atcggtgctcttcctcaagttaaaaatgagttcactgttgttgttgatgatgtttcaact
ggaaagactcctgcaaatggcagtccaggaaatgacagtcctcctggaagtgacaggaaa
aggatcagaaggccttacaatacaaagacgtacaaggtcgaactctcttttgcggcaaga
attcctatgagtgcaatctcacaggccctcagaggtcaggaatcagagcacacgcaggaa
gcaattcgagtgattgacattattctgaggcagcactcagctaagcagggttgcctatta
gtaaggcaatcattcttccacaataatccttctaactttgttgacctgggtggtggtgta
gtgggctgtagagggtttcattctagttttcgtgcaacccagagtggactttcactcaac
atcgatgtgtccaccacaatgatagtgaaacctggtcctgtcattgattttctgcttgcc
aatcagaaagttaatcatccaggcatgattgattgggctaaggccaagcgttcactgaag
aacttgaggatcaaaacaagtccagcaaaccaagaacagaagattgttggtctcagcgac
agaccttgctgtgagcaattattcacactgaaacataagaatggtaatggagactctgaa
gagatcactgtttatgattacttcgtaaagaaccgtggcatagagctgcaatactctggt
gatcttccatgtatcaatgtgggaaaaccaaagcggccaacatattttccagttgagtta
tgcagtcttttgcctttacaaaggtacactaaagctttgagcacacttcagaggtcatca
cttgttgagaaatctaggcagaaaccacaagaaaggataggtgttttgtctgatgtactg
caaagaagcaactatgatgcagagcccatgctgaaggcctgcgggattacaattgctaga
agttttaccgaagttgatggtaggatactgcagccccccaagcttaaagctggcaatgga
gaagacatttttacacgcaatggtagatggaacttcaacaataagaggctcattaagggt
agcagtgttgagaaatgggcagtggtcaacttttctgcacgatgcaatgtcagggatctt
gtccgtgatctcatcaagtgtggaggcatgaaggggattatggttgaagctccttttgat
gtatttgaggagaatccttcgatgagacggtcgcctgctgtaagaagggttgaagacatg
tttgaacaagtcaaaaccaagcttcctggagctccgaagtttcttttgtgtgttctagct
gaaagaaagaattctgatatttatgggccttggaagaagaaatgccttgctgaatttggg
atcgttacacagtgcgtggcaccaactagagtcaatgatcagtatcttacaaatgtccta
ctaaagataaatgcaaagctgggtggcatgaattcgttgctccaaattgaaacatcccca
gcaattcctcaagtatccaaggtcccaactataatcttgggaatggatgtctcccatggt
tctcctggacattctgatgtaccgtccattgctgctgttgttagttctcgtgaatggcct
cttatctcgaaatatagagcttctgtccgcacccaatcacctaagatggaaatgattgac
tctttgtttaagccacgggaaactgaagatgatggtctgatccgggagtgtctgattgac
ttctacaccagttctgggaagaagaagcctgaccaagtcatcatcttcagggatggtgtt
agtgaaagtcagtttaatcaggtgctgaacattgagttgcaacaaatcatcgaggcttgc
aagtttttggatgaaaaatggaatccaaagttcacgttgattattgcccagaagaatcac
cacactaaattttttattcctggaaagacagaaaatgttccagctggaactgttgtggac
aacaaagtttgtcatccaaggaactttgacttctacatgtgttcacatgctggaatgatc
gggactacgaggccaactcattatcatatactgcatgatgagataggcttcaatcctgat
gatctgcaggagctggtgcattcgctctcttacgtgtaccaaaggagcacaacagccata
tcagttgttgctcccatctgctatgcacatctggcagcagctcaggtcggccagttcatt
aagttcgatgagatgtcggagacatcctccagccatggcggccatacttcggcgggcagc
gtccctgtccaggagctacctcgtctacatgagaaagtcaggagctcgatgttcttttgc
tga
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