Sorghum bicolor (sorghum): 110434084
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Entry
110434084 CDS
T01086
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00061
Fatty acid biosynthesis
sbi00071
Fatty acid degradation
sbi01100
Metabolic pathways
sbi01212
Fatty acid metabolism
sbi04146
Peroxisome
Module
sbi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110434084
00071 Fatty acid degradation
110434084
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110434084
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbi01004
]
110434084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
110434084
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110434084
Lipid biosynthesis proteins [BR:
sbi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110434084
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
110434084
Exosomal proteins of breast cancer cells
110434084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110434084
NCBI-ProteinID:
XP_021313453
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All DBs
Position
3:complement(59623243..59628706)
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AA seq
662 aa
AA seq
DB search
MVAGSMKHLVEVEPAKEAAGGAPSAGPTYRCAAGDNSASPPAVPGLDCCWDIFRMSVEKY
PDNKMLGRREIVDGKAGSYTWLTYKQVYDTVLKVGAAIRSCGVGKGGRCGIYGANSPEWV
ISMQACNAHGIYCVPLYDTLGAGAVEFVLCHAEVQIAFVEEKKVGEMLKTFPNATKYLKT
IVSFGKVDPVHKEKVEQNGLSIYSWEEFLQLGGEEKFELPPKEKDDICTIMYTSGTTGDP
KGVLISNKSIVTIVSAVDEFLNNSNEQLHGDDVYISYLPLAHIFDRVIEEVFIRHGASIG
FWRGDVKLLVEDIGELKPTVFCAVPRVLDRIYGGLQDKVTAGGFLKKTLFNVAYKYKQGN
MLKGSKHEEAAAIFDRLVFTKVKRGLGGRVRLILSGAAPLSRHVEEYLRVVTCSHVLQGY
GLTETCAGSFVSLPNNMSMLGTVGPPVPYVEVRLESVPEMGYDALSSEMPRGEICIRGDT
LFSGYYKREDLTNEVLVDGWFHTGDIGEWQSDGSMKIIDRKKNIFKLSQGEYVAVENLEN
IFGQTPGVDSIWVYGNSFESSLVAVVNPNKQALERWAESNGVTGDFATICEDPKAKEFVL
GELTKMGKEKKLKGFELIRAVHLDPAPFDMERDLITPTYKKKRPQLLKHYQSIIDGMYKS
MK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgggatcgatgaagcacctcgtggaggtggagccggcgaaggaggcggcgggt
ggggcgccgtcggcggggccgacgtaccgatgcgcggccggtgacaactccgcgtcgccg
cccgccgtgccggggctcgactgctgctgggacatattccgcatgtccgtcgagaagtac
cccgacaacaagatgctgggccgccgcgaaattgtcgacgggaaggctggcagctacaca
tggctgacttacaagcaggtatacgacaccgtgctcaaggttggggctgccatccggagc
tgtggcgtcggcaagggcggtcggtgcggcatctatggagccaattctcctgagtgggtc
atcagtatgcaggcctgcaatgcccatggcatttactgtgttccactgtatgacacgctt
ggtgctggggcagtagaatttgtattgtgccatgcagaggtacaaattgcttttgttgag
gaaaagaaagttggagagatgctcaagacatttcccaacgcgaccaaatatttgaagaca
attgttagcttcggtaaggttgatcccgtgcacaaggaaaaagttgaacagaatggcttg
tccatctactcatgggaagagtttctgcaactgggaggtgaagagaagtttgaacttcca
cccaaggaaaaggatgacatatgcacaataatgtacaccagtgggacaactggtgatccc
aagggagtactaatctcgaacaagagcattgttaccattgtttcagcagtagatgagttc
ctcaacaactcaaacgagcagcttcacggggatgatgtttacatttcatatcttccactt
gctcatatctttgaccgggtgattgaggaggtgttcattcgccatggtgcttcaatcgga
ttttggcgtggggatgtcaaactcttggttgaagacattggagaactcaaaccaacagta
ttttgtgctgttccacgtgttctggacagaatttatggaggattgcaagataaagttaca
gctggtggtttcttgaagaaaaccttgttcaatgttgcttacaaatacaaacaaggcaat
atgttgaagggaagcaagcatgaagaagctgctgcaatctttgatagactggtcttcacc
aaggtgaaacggggactaggtggaagggttcgcctgattctatctggcgcagctccccta
tctagacatgttgaggagtatctgcgtgtggtgacatgctcccatgtccttcaaggatat
ggactcacggaaacctgtgctgggtcctttgtttccttgccgaacaacatgtccatgctg
ggaactgtcggccctccagtcccatacgtcgaagtacgcctggaatctgtccctgagatg
ggttacgatgcactgtcaagcgagatgcctcgtggggaaatttgcatcagaggggacacc
ttgttctcggggtactacaagcgagaggacctaaccaacgaagtcttggtcgatggctgg
ttccacacaggagacattggggagtggcagtccgacggaagcatgaagatcattgaccgc
aagaagaacattttcaagctctcacaaggagagtacgttgcggttgagaatctggagaac
atctttggtcaaactcctggtgttgattcgatttgggtctacggcaacagcttcgagtca
agcctggttgcagttgtgaaccccaacaagcaagcactggaacgttgggcagagtcgaac
ggggtaaccggagactttgccacgatatgcgaagaccctaaagcgaaagagttcgtcttg
ggagaacttacaaagatggggaaagaaaagaagctcaaaggcttcgagctcatcagggct
gttcatctggaccccgcaccattcgacatggagcgcgatcttatcaccccaacgtacaag
aagaagcggcctcagctgctgaaacactatcagagcatcattgacggtatgtacaagagc
atgaagtag
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