KEGG   Sorghum bicolor (sorghum): 110434981
Entry
110434981         CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03020  RNA polymerase
sbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110434981
  09124 Replication and repair
   03420 Nucleotide excision repair
    110434981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    110434981
   03400 DNA repair and recombination proteins [BR:sbi03400]
    110434981
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110434981
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110434981
SSDB
Motif
Pfam: RNA_pol_Rpb4 Virul_fac_BrkB
Other DBs
NCBI-GeneID: 110434981
NCBI-ProteinID: XP_021315823
LinkDB
Position
4:60221816..60226162
AA seq 245 aa
MDRVPNGRPKVSNRPVVVLSDSDSDSEGFVEALTPVHSKSNGKASSASLKTGGKASAFSK
GEASNGKAYSSGKGGKGSSSHAVPTKSDAELKLELDIPPNSRILMNCEAAELLQEIHEHM
AILSEDPKIKIPESFDKAFQYAKDGNHFTTASSVKQALEPLKKCGVSDGEVCYSFFSLFP
FCVELTSSHSTIVVCVQQICMIANVGPETVEEVYALVPSLKANRSATEGSVTEVLAVLAN
IKAAK
NT seq 738 nt   +upstreamnt  +downstreamnt
atggatcgagtaccgaatggaaggcctaaggtttccaacagacctgtagttgtgctttca
gattctgattctgactctgaaggttttgtagaagcgctgactcctgttcactcgaagtca
aacgggaaggcttcgtcggcgagcctaaaaactggtgggaaggcttcagccttttctaaa
ggagaggcaagcaatggaaaagcatacagtagtggcaaaggtggaaagggttcttcgtca
catgcggtgcctaccaagtctgatgcggaactaaagctagagcttgatatccctccaaat
tctagaattcttatgaattgtgaagcagctgaactattgcaagaaattcacgagcacatg
gctatactatcagaggaccccaagatcaaaattcctgagtcatttgacaaagcctttcag
tatgcaaaagatggaaatcatttcaccactgcaagctctgtgaaacaagcccttgaacct
cttaaaaaatgtggggttagtgatggcgaggtttgttactcatttttttctctctttcct
ttctgtgtagaactaacctcatctcactctacgattgtggtgtgtgtacaacagatatgc
atgatagcaaacgttgggcctgagactgttgaagaggtttatgcactagtgccatctctc
aaggctaataggtcagctaccgaaggttcagtcactgaggttcttgctgtccttgcaaac
ataaaagctgctaagtga

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