Sorghum bicolor (sorghum): 110435114
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Entry
110435114 CDS
T01086
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
110435114
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
110435114
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110435114
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110435114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
TPR_GEMI5
HEAT_GCN1
Clathrin
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
110435114
NCBI-ProteinID:
XP_021316152
LinkDB
All DBs
Position
4:complement(7497894..7513067)
Genome browser
AA seq
920 aa
AA seq
DB search
MPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCVWNYQTQTMVKSFEVTDLPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWSLGSPDPNFT
LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE
LPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG
REVPVASMDSSGKIIWAKHNEIQTVNIKSVGADNEIADGDRLPLAVKELGSCDLYPQSLR
HNPNGRFVVVCGDGDYIIYTALAWRNKSFGTALEVVWSTDGEYAIRESTSRIKIYTKNFQ
EKKSIRPSFSAERIFGGVLLAMCTNDFICFYDWVDCRLIRRIDVNVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSSHLDGGGSAGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEYKTLVM
RGDFDRANDVLSSIPKEQYDSVARFLESRGMLEEALEIATDTNYKFDLAVQLGRLEIAKA
IATEVQSESKWKQLGELAMSNGKLEMAEECLLYAMDLSGLLLLYSSLGDADGIKKLASVA
KEQGKNNVSFLCFFMLGKLEECLQLLIESNRIPEAALMARSYLPSKVPEIVALWKKDLQK
VNPKAAESLADPNEYPNLFDDWQIALNVEAVVAPKRGIYPPAEEYMIHAERSNESLVEAF
KNMHVHEEMVPDDNEDTVHEVIEDGVEESQEDAVEVDAEDDGVEESQDEAVEVEAEGSTD
GAVLVNGNSSEEQWVLTPEQ
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccggttggatatcaagaggaagctcgcgcagaggtccgagagggtgaagtcc
gtggatctgcatccgacagagccatggattttgtcgagtctgtactcgggaagcgtttgt
gtatggaactaccagactcagacaatggtgaaatcatttgaagtcacggatttaccagtt
cgttcggctaaatttattgcacgtaagcaatgggttgttgctggtgctgacgatatgttc
atccgtgtgtacaactataacacaatggacaaggtcaaggtttttgaagctcacactgat
tacattaggtgtgtggctgttcatccaacgcagccctttgtgctatcatcgtccgatgac
atgctgattaagctgtgggattgggataaaggctgggtgtgtactcaaatattcgaaggg
cattctcactatgtgatgcaagttacatttaacccaaaagataccaacacctttgccagt
gcttccctggatcgcacaataaagatatggagtcttggttcccctgacccaaatttcaca
ctagatggccattcaaaaggtgtgaactgtgttgattacttcactggtggtgatcgacca
tacttaattactggctctgatgatcagactgcaaaggtttgggactaccaaacaaagagt
tgcgttcaaacacttgaaggacatgcacataatgtgtctgctgtatgtttccatccagag
ctacctataataattactggttcagaggatgggacagttcgaatgtggcattctactacc
tacaggcttgagaacactcttaactatggccttgagcgagtttgggctttaggatatatg
aaagggtcaagaagggtcgtgattggatatgatgaagggacaataatgataaaaattggt
cgtgaagttcctgttgctagcatggatagcagtgggaaaattatatgggcaaagcataat
gaaatccaaactgttaatatcaagagtgttggtgcagacaatgagatcgcagatggtgat
cggttaccattggccgtgaaggagttgggaagctgcgatctttatccacaaagcttaagg
cacaatccgaatgggagatttgttgttgtatgcggagatggagattacataatatacaca
gcattagcatggagaaacaaatcatttgggaccgcacttgaagttgtttggtcaactgat
ggagaatatgccatcagagaaagcacctcgaggataaagatatacactaaaaatttccag
gagaagaaaagtataaggccatcattttctgctgaacggatatttggtggagtgttactt
gctatgtgtacaaatgacttcatttgcttctatgattgggtggattgcagattgatacgt
cgaattgatgtcaatgtgaagaatctttactgggccgacagtggtgatttagtaacaatt
gcaagtgatacgtcattctacattttgaaatataatagggatgtagtttcatctcatttg
gatggagggggttcagctggtgaggaaggtgtggaagatgcctttgaactgcttcatgag
atcaatgaacgtgtccgcactgggctatgggttggcgattgcttcatctacaataattct
tcatggcggcttaattactgtgtaggaggagaggtcacaaccttgtttcacttggatcgg
ccaatgtatttactaggatatcttgcaaaccaaagccgtgtctatcttattgataagcaa
tttaatgttgtggggtatactttactccttagtttgatcgagtataaaacacttgtaatg
cgtggggattttgatcgcgcgaatgatgttttatcatctataccaaaggaacaatatgac
agtgtggcacgtttcttggaatcacggggaatgttggaggaagccctcgagatagcaact
gacactaattacaaatttgacctggctgtgcagcttggtcgacttgaaattgcgaaggcg
attgctaccgaggtgcaaagtgagtccaagtggaagcaattaggggagttagctatgtca
aatggaaagcttgagatggcagaggagtgtcttctatatgctatggacctcagtggtttg
ttgcttttgtattcttcccttggggatgctgatggcattaagaaattggcatctgtagcc
aaagaacaaggaaagaacaatgtttctttcctttgtttcttcatgctaggaaagctggaa
gagtgtcttcaattgctaatagaaagcaaccgtattccggaagcagcattgatggcaaga
tcttatcttcctagcaaagtccctgagattgtagcattgtggaaaaaggatctccagaag
gtaaacccaaaagcagcagagtcgctggctgatcctaatgagtacccaaacttatttgac
gactggcagattgctctcaatgtagaagctgttgttgccccgaaaaggggtatctatcca
ccggccgaggagtacatgattcatgctgaaaggtcaaatgagagtttagtggaagctttt
aaaaatatgcatgtacatgaagagatggtaccagatgataatgaagatactgttcatgag
gttattgaggatggagtagaagagagtcaagaagatgctgttgaggttgatgcagaggat
gacggagtagaagaaagtcaagatgaagctgttgaggttgaggcagagggttcaactgat
ggtgctgtccttgtgaatggaaacagtagtgaggaacagtgggtgctgactcctgagcaa
tag
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