Sorghum bicolor (sorghum): 110435536
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Entry
110435536 CDS
T01086
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
110435536
03041 Spliceosome [BR:
sbi03041
]
110435536
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110435536
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110435536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
RRM_DEAH11
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
110435536
NCBI-ProteinID:
XP_021316855
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All DBs
Position
5:complement(67527640..67534850)
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AA seq
441 aa
AA seq
DB search
MHPQRMKQAAAQQQLMQQALLLQQQQAQQPPLFPGHHHPHPGLLAAPQMEPIVSGNLPPG
FDSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALA
ILSLNGRPLYGQPIKVNWAYTSTQREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSD
ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEEKQI
VDSKVDLTNGTSESGKENPNEDGPESNPQFTTVYVGNLPHEATNNDVHLFFHSLGAGSIE
EVRVTRDKGFGFVRYSTHEEAAQAIQMANGQLIGGRQIKCSWGSKPTPPGTASSPLPPPA
PALFSTGVSPTDFLAYQRMALNKMATNPSLMGQHALNQVALGMGGRASQSIYDGGFQGIS
TAAATTSAQQQQQQQQQLMYY
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgcagcggatgaagcaggccgcggcgcagcagcagctgatgcagcaggccctg
ctcctgcagcagcagcaggcgcagcagccgcccttgttcccggggcaccaccacccgcac
cccggcctcctcgccgcgccacagatggagccaatagttagtggaaacctgcctcctggg
tttgattcgagtacatgccgcagcgtgtatgttggcaatatcagtcttcaagtgacggac
acagtactgcaggaagtcttccaaagtattggtccagtagaagggtgcaaactcatcagg
aaagaaaagtcatcctttggtttcattgactactatgaccgcagatatgctgcactagca
attttatctctcaatggcagaccactgtatggtcagccaataaaagttaattgggcatat
acaagtactcagagggaggatacatcaggtcattttaatatttttgttggggatctttgc
ccagaagtcactgatgctactttgtttgcatttttctctggatactctacctgctcagat
gctagggttatgtgggaccagaaaacaggacgatccagagggtttggttttgtttctttc
aggaaccagcaggatgctcaaagtgcgataaatgacttgaatgggaagtggcttggcaac
cgtcaaattcgttgcaattgggcaacgaaaggtgccaatgctggtgaagagaaacagatt
gtggactccaaggttgacctgacaaatggcacatcagaatctggaaaagagaatccaaat
gaagatggtcctgaaagtaaccctcagtttactactgtctatgttggcaatcttcctcac
gaggctaccaacaatgatgtgcacctgtttttccattcacttggggctggctcaattgag
gaagtccgtgtaactcgtgataaaggctttggttttgtaaggtacagcacccatgaggag
gctgcgcaggcaattcagatggctaatggccaacttattggcgggaggcagataaagtgt
tcctggggaagcaaaccgactccaccagggacagcatcctcgcctctgcctcctccagca
ccggcactgttctccactggagtgtcgccgacagacttcctggcataccagcgcatggcc
ctgaacaagatggccacgaacccatccctaatgggtcagcacgccttgaatcaggtcgca
ctggggatgggtggccgagccagccagtccatctatgatggcggcttccagggcatcagt
actgccgccgccacaacctccgcccagcaacaacagcagcagcagcagcagctcatgtac
tactag
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