Sorghum bicolor (sorghum): 110435564
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Entry
110435564 CDS
T01086
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00061
Fatty acid biosynthesis
sbi00071
Fatty acid degradation
sbi01100
Metabolic pathways
sbi01212
Fatty acid metabolism
sbi04146
Peroxisome
Module
sbi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110435564
00071 Fatty acid degradation
110435564
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110435564
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbi01004
]
110435564
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
110435564
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110435564
Lipid biosynthesis proteins [BR:
sbi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110435564
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
110435564
Exosomal proteins of breast cancer cells
110435564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4229
Motif
Other DBs
NCBI-GeneID:
110435564
NCBI-ProteinID:
XP_021316893
LinkDB
All DBs
Position
5:1889224..1897231
Genome browser
AA seq
726 aa
AA seq
DB search
MGEVSDDNSNMSFLKRIATSDVPLLKEYGVNGVVVALLLAVVTPILLSMMFGKKTKQRAV
RADVGGEEGFAMRNSRFPSLVAVPWEGATTMAALFEMASKKYSRRRCLGTRKLIKREFIE
SSDGRKFEKLHLGEYEWDTYTEAFNRACNFASGLIKMGHDLDSHAAIFSDTRAEWIIAAQ
GCFRQNLTVVTIYASLGEDALVHSLNETQVSTLICDSKQLKKIPAISSKLQSLKHIIYIE
DEPVEAETLNQVKHLTTLSFTEVEELGKTSHVDARLPSSSDTAVIMYTSGSTGLPKGVMI
THGNMVATTAAVMTIVPNLGKNDVYLAYLPLAHVFELAAETVMLASGTAIGYGSALTMTD
TSNKIKKGTKGDVSVLNPTLMISVPAILDRIRDAVFKKVGEKGGLTKKLFDFAYKRNLAA
IEGSWFGSWAPERMIWDNIIYKPIRAMLGGRVRFVLCGGAPLSSDTQRFMNICLGVPVGQ
GYGLTETCAGAAFTEWDDTSVGRVGPPLPCSYVKLVSWEEGGYRISDSPMPRGEVVVGGH
SITKGYFNNEAKTNEVYKVDERGIRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVS
LGKVESALATSNYVENIMVYADPFHSYCVALVVPAHQALEKWAQNSGINYKGFEELCQND
QANKEVQQSLSKAAKAARLEKFEVPAKIMLLPEPWTPESGLVTAALKLKREQIKTKFKDD
LDKLYH
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagttagtgatgataattccaacatgtcctttctaaaaagaatcgctacaagt
gatgtaccgctgttgaaagagtatggtgtgaatggagtcgtcgtcgctctgcttctggct
gtagttactcctatcttgctttccatgatgtttggcaagaagacaaagcaaagggcggtg
cgagctgatgtgggtggagaggagggatttgccatgcggaacagtaggtttccctcctta
gttgcagtcccatgggagggcgccaccacaatggcagctctgttcgagatggccagcaaa
aagtactctcgacggaggtgtcttggcacaaggaagctaattaagagggaatttatcgaa
tcttctgatggtaggaagtttgagaaactgcaccttggtgaatatgaatgggatacctac
actgaggcatttaaccgcgcatgtaattttgcttctggacttatcaagatgggccatgac
ctagatagtcatgctgctatattctctgatacaagagctgagtggatcattgctgctcag
ggatgcttccgacaaaatttaactgtagtaacaatatatgcatctcttggtgaggatgca
ctggtgcattcactaaatgagacacaggtttcaactctgatatgtgattcgaagcaactt
aagaagatacctgcaatcagctctaaattgcagagtcttaagcatattatctatattgag
gatgaacctgttgaggctgagacactgaatcaagtgaagcatctgacaacattgtctttc
actgaagtagaggagctaggcaagacatctcatgttgatgcaagattaccttcaagctct
gatactgcagttatcatgtatacaagtggaagtactggtcttcccaagggtgtaatgatc
acacatggcaacatggtggctacaactgcagcagtcatgacaatagtcccaaaccttggc
aagaatgatgtttatctggcttaccttccattggctcatgtctttgaactagcagcagag
actgtcatgttagcttctggtactgctattggatatggttcagcattgactatgactgat
acatcaaacaagattaagaaggggacaaaaggagatgtttctgtactgaatcctactctt
atgatttcagttcctgcaattttggatcgtatcagagatgcagtgtttaagaaagttggt
gagaagggtggcctgacaaaaaagctgtttgattttgcatataagcgaaaccttgcagca
attgaggggagttggtttggatcttgggcaccggagaggatgatatgggataacattatt
tataaaccaataagggcaatgcttggaggacgtgtaagatttgttctttgtggtggtgca
cctctatcaagtgacacgcagagatttatgaatatatgtctaggtgtcccagtgggtcaa
ggctatggattgactgaaacttgtgctggagcagctttcactgaatgggatgacacaagt
gtgggtcgtgttggtccaccgcttccttgctcctatgtcaagcttgtttcgtgggaagaa
ggtggttataggatttctgattctccgatgcctagaggagaggtcgtggttggtggacac
agcataacaaaaggttatttcaacaacgaagcaaagacgaatgaagtatacaaggttgat
gagaggggcatacgctggttctacactggtgatattggtcagttccatcctgatgggtgc
cttgagattattgacaggaaaaaagatatagtaaagcttcagcatggagaatacgtgtct
cttggcaaggttgaatcggctctagcaacaagcaattatgtggagaacatcatggtttat
gccgatccatttcatagttattgtgttgccctggttgttccggcacaccaggccttggag
aagtgggctcaaaattctgggataaactataaaggctttgaagagctttgccaaaatgat
caagcaaataaggaggttcagcaatcactatcaaaggccgcgaaagcagcgaggctcgag
aaattcgaggtgccagcgaagatcatgctgttgcctgaaccgtggacaccggagtctggg
ctggtgacagcggcgcttaaactgaagagggagcagataaagaccaaattcaaagacgat
ttggacaagctctaccactga
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