Sorghum bicolor (sorghum): 110435897
Help
Entry
110435897 CDS
T01086
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
110435897
03029 Mitochondrial biogenesis [BR:
sbi03029
]
110435897
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110435897
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110435897
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
110435897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
Viral_helicase1
UvrD_C_2
Herpes_Helicase
AAA_19
AAA_16
ResIII
AAA_22
AAA_11
T2SSE
SLFN-g3_helicase
PhoH
cobW
TrwB_AAD_bind
AAA_5
Motif
Other DBs
NCBI-GeneID:
110435897
NCBI-ProteinID:
XP_021317670
LinkDB
All DBs
Position
5:19495297..19496934
Genome browser
AA seq
545 aa
AA seq
DB search
MSEDYRRNNQSTFAVEQMVLIDIRKLLESMQKDIKMYPLPDIDDTYDPSGDIPREIFEEA
SVEASIDDMALSKTLNKEQRAAYNEIMSAIDTDHGGLFFVDGPGGTGKTYLYRALLATIR
SQNKIAVATATSGVAASIMPGGRTAHSRFKIPLTLDNGAFCTFTKQSGTAKLLQTASLII
WDEVTMMKRQGVEALDNSLRDIMDRPNLPFGGKTMVFGGDFRQVLPVVRRGSRAQIVGAS
LRMSYLWNSMRHLKLVRNMRAKNDPWFAEYLLRIGGGSEEANCNGEIHLPDDICIPQNGK
DGDLDMLIDCIFPALNANMSDKSYITSRAILSARNDSVDMINMKMISRFQGDEMVYHSFD
SVVDDPHNHYPSEFLNTLTPNGLPPHVLKLKIGCPIILLRNIDPAGGLCNGTRLVVRGFQ
RNIIDAEIMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTL
PNVGVYLPEPVFSHGQLYVALSRATARLNIRILAVLPSDTNDKKNNTKINGTYTKNIVYK
EVLTL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggactacaggcgcaataaccaatcaacctttgcggtggagcagatggtcctc
atagatattcgaaagttgttagaatcaatgcagaaggacataaagatgtacccacttcct
gatatcgatgacacatatgatccatccggtgatattcccagggagatttttgaggaggct
agcgttgaggcaagcattgatgacatggcactatcaaagacccttaacaaggagcagcgg
gctgcctacaatgagattatgtctgctattgataccgatcatgggggtttgttctttgtg
gatggacctggcggcacaggaaagacttatctatatagggccctactcgctactatacgt
agtcagaacaagattgctgtggcaacagcaacatctggtgttgctgcgtcaataatgcct
ggtggtagaaccgcccactcacgcttcaagattcccctcaccctcgataatggagccttt
tgtaccttcacaaaacagagtggtactgccaagctgcttcagaccgcatcccttattatt
tgggacgaggtgacaatgatgaagagacaaggtgttgaggcgctagacaacagcctccgt
gatatcatggaccgtcctaacctcccgtttggggggaagactatggtgtttggtggagat
tttaggcaggttctcccagttgttcgaagagggtctagggcacaaatagttggtgcctca
ctgcggatgtcgtacctttggaattccatgcgacatctcaaattggtgcgcaacatgagg
gcaaagaacgatccatggtttgcagaatacttgctacgtattgggggaggctctgaggag
gctaattgtaatggtgaaatccaccttcctgatgatatatgcataccacagaatggaaaa
gacggtgatcttgatatgttaattgactgcatatttcctgccctcaatgccaatatgtca
gacaagagctacatcacctcacgagcaatattatctgcgcggaacgactctgttgatatg
attaacatgaagatgataagtcgtttccaaggggatgagatggtgtaccatagctttgat
agtgtcgtggatgatccacacaaccactacccatctgagttcctcaacactttgaccccc
aatggtcttcctccacatgtgttaaagcttaagattgggtgtccgatcatattgctaagg
aacatcgaccctgcaggtggactttgcaatggaaccagactggtggttcgagggttccaa
agaaatattatcgatgcagaaattatggttggagaccatgccggaaagcgaatcttccta
ccacggattccgttatgtccctcggatgatgagatgtttccgttccagttcaagaggaag
cagtttcctattagactcagttttgccatgacgattaacaaagcacaggggcagactctt
cccaatgttggtgtgtatttgcctgaaccagtgttctctcatggccagctgtatgttgcg
ctatctagagccactgccagattgaatatcaggatccttgctgtcctgcccagtgatacg
aatgataagaaaaataatacaaaaataaatggtacatacacaaaaaatattgtctacaaa
gaggtcctcactctatga
DBGET
integrated database retrieval system
