KEGG   Sorghum bicolor (sorghum): 110436107
Entry
110436107         CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03020  RNA polymerase
sbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110436107
  09124 Replication and repair
   03420 Nucleotide excision repair
    110436107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    110436107
   03400 DNA repair and recombination proteins [BR:sbi03400]
    110436107
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110436107
  RNA polymerase III system
   RNA polymerase III
     110436107
  RNA polymerase I system
   RNA polymerase I
     110436107
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110436107
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF6179 NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 110436107
NCBI-ProteinID: XP_021317965
LinkDB
Position
6:complement(49250048..49254221)
AA seq 206 aa
MASSDDETSRLYRIRRTVHEMLRDRGYAVSEEEINLPRDRFIDRFGNPVRRDDLASSAMK
LDGSSEQIYVFFPNEAKPGVKTIRNYVEKMKQENVFAGILVVQQALSAFARSAVQEVSQK
YHLEVFQEAELLVNIKNHVLVPDHVLLTAQEKKSLLERYTVKETQLPRIQITDPIARYYG
MKRGQVVKITRSSETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgtcctcggatgacgagacgagccggctctaccgcatccgtcgcacggtgcatgag
atgctgcgcgaccgcggatacgcggtcagcgaggaagaaatcaatctcccaagggacagg
ttcatcgaccgcttcggcaaccccgtccgccgcgacgacctcgccagcagcgccatgaag
ttggacggctcctccgagcagatctacgtgttcttccccaatgaggccaagcccggggtg
aagacgatcaggaactacgtcgagaagatgaagcaggagaacgtcttcgccggcatactc
gtcgtgcagcaggcgctcagcgcgttcgcacgcagcgccgttcaggaggtctcccagaag
taccacctcgaagtcttccaggaagctgagcttcttgtcaacattaagaaccatgtgcta
gtgccagatcacgtgctcctgacagcacaagaaaagaagtctcttctagagcggtacacc
gtgaaggaaacccagctcccccggattcagattacagacccgatagcaagatactatggg
atgaagcgcgggcaggtcgtgaagatcacccgatccagtgaaactgctggaagatacatc
acctaccgctacgttgtctga

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