KEGG   Sorghum bicolor (sorghum): 110436187
Entry
110436187         CDS       T01086                                 
Name
(RefSeq) calnexin homolog
  KO
K08054  calnexin
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04141  Protein processing in endoplasmic reticulum
sbi04145  Phagosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110436187
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110436187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:sbi03110]
    110436187
   04131 Membrane trafficking [BR:sbi04131]
    110436187
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:sbi04091]
    110436187
Chaperones and folding catalysts [BR:sbi03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   110436187
Membrane trafficking [BR:sbi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    110436187
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    110436187
Lectins [BR:sbi04091]
 L-type lectins
  110436187
SSDB
Motif
Pfam: Calreticulin OAD_gamma CFAP143
Other DBs
NCBI-GeneID: 110436187
NCBI-ProteinID: XP_021318249
LinkDB
Position
6:complement(41901255..41904672)
AA seq 533 aa
MMGGRALLLLLVSALLVQIRASDPLLYEPFDEDFEGRWVVSKKDEYQGVWKHAKSDGHED
YGLLVSEKARKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYIKYIRPQDAGWDA
KEFDNETPYTIMFGPDKCGSTNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTA
ILKPDNEVRILVDGEEKKKANFLSADDFEPALIPSKTIPDPDDKKPEDWDERAKIPDPDA
VKPDDWDEDAPMEIVDEEATKPEGWLDDEPEEIDDPEAAKPEDWDDEEDGEWEAPKIDNP
KCEEAPGCGEWKRPMKQNPAYKGKWHAPMIDNPNYKGIWKPQEIPNPEYFELDKPDFDPI
AAIGIEIWTMQDGILFDNILIADDEKVATSILEKTWKPKYDVEKEKEKAEEAAAGADGLS
EFQKKIFDVLYKIADVPFLAPYKTKIIDVIEKGEKQPNITIGILVSVVIVFVTVLFRILF
GGKKPAVPVKPAAEAKKPKATETDGAGSSGDKDEKEDEKEETAAPRRRTRRET
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgatgggagggcgcgcgctgctgctgctcctcgtctcggcgctgctcgttcagatccgc
gcctccgatccgctgctgtacgagccgttcgacgaggacttcgaggggagatgggtcgtc
tccaagaaggacgagtaccaaggtgtgtggaagcatgccaagagtgatggccatgaagac
tatggcctccttgtcagtgagaaggcaaggaaatacgccataatcaaggagcttgatgag
ccagttactttgaaggatgggacagtggtcctgcagtttgaagtgaggcttcagaatggc
cttgaatgtggaggtgcctacattaagtacatccgccctcaggatgctggatgggatgcc
aaggagtttgataatgagactccatacacaattatgtttggtccagataagtgtgggtca
accaacaaggttcatttcatccttaagcacaagaatcccaagactggaaagtatgttgag
catcacctcaaattcccaccttctgtcccatatgacaagctctctcatgtctacacggct
atcttgaagccagacaatgaggtcagaattttggtcgacggggaagaaaagaagaaggca
aacttcctttctgctgatgattttgagccagcacttatcccatccaagaccattcctgac
cctgatgacaagaagccagaggactgggatgagagagctaaaatccctgatccagatgca
gtgaaacctgatgactgggatgaggatgcccccatggaaattgtggatgaggaagccacc
aagcctgagggatggttggatgacgagcctgaggagattgatgatcctgaggcagccaag
cccgaggactgggatgatgaggaggatggtgaatgggaggcgccaaagattgacaaccca
aagtgtgaagaggcacctggatgcggtgagtggaagaggccaatgaagcagaatcctgct
tacaagggcaagtggcatgcacctatgattgacaaccccaactacaaggggatctggaag
cctcaggagatccccaaccctgagtactttgagcttgacaagcctgattttgatccaatt
gctgctattggtattgagatctggacaatgcaggatggcatcctgtttgacaatatcttg
attgctgatgatgagaaggttgccacctccattctggagaagacctggaagcccaagtat
gatgttgagaaggaaaaggagaaggctgaggaggctgctgctggtgcggatggtctttct
gagttccagaagaagatttttgacgtcctgtacaagattgctgatgttccgttcttggca
ccctacaagaccaagatcattgatgttatcgagaagggagagaagcagcccaacatcact
attggcattttggtctccgttgtcatcgtgttcgttactgttctcttcaggatccttttt
ggtggcaagaagccagcggtacctgtgaaacccgcagctgaggcgaagaagcccaaagcc
acagagaccgacggtgctggaagcagtggtgacaaggatgagaaagaggacgaaaaggag
gagacagcagccccacgtcggaggacccgcagggagacgtag

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