Sorghum bicolor (sorghum): 110436187
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Entry
110436187 CDS
T01086
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
sbi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110436187
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110436187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sbi03110
]
110436187
04131 Membrane trafficking [BR:
sbi04131
]
110436187
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sbi04091
]
110436187
Chaperones and folding catalysts [BR:
sbi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
110436187
Membrane trafficking [BR:
sbi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
110436187
Autophagy
ER-phagy
Other ER-phagy associated proteins
110436187
Lectins [BR:
sbi04091
]
L-type lectins
110436187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
OAD_gamma
CFAP143
Motif
Other DBs
NCBI-GeneID:
110436187
NCBI-ProteinID:
XP_021318249
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All DBs
Position
6:complement(41901255..41904672)
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AA seq
533 aa
AA seq
DB search
MMGGRALLLLLVSALLVQIRASDPLLYEPFDEDFEGRWVVSKKDEYQGVWKHAKSDGHED
YGLLVSEKARKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYIKYIRPQDAGWDA
KEFDNETPYTIMFGPDKCGSTNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTA
ILKPDNEVRILVDGEEKKKANFLSADDFEPALIPSKTIPDPDDKKPEDWDERAKIPDPDA
VKPDDWDEDAPMEIVDEEATKPEGWLDDEPEEIDDPEAAKPEDWDDEEDGEWEAPKIDNP
KCEEAPGCGEWKRPMKQNPAYKGKWHAPMIDNPNYKGIWKPQEIPNPEYFELDKPDFDPI
AAIGIEIWTMQDGILFDNILIADDEKVATSILEKTWKPKYDVEKEKEKAEEAAAGADGLS
EFQKKIFDVLYKIADVPFLAPYKTKIIDVIEKGEKQPNITIGILVSVVIVFVTVLFRILF
GGKKPAVPVKPAAEAKKPKATETDGAGSSGDKDEKEDEKEETAAPRRRTRRET
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagggcgcgcgctgctgctgctcctcgtctcggcgctgctcgttcagatccgc
gcctccgatccgctgctgtacgagccgttcgacgaggacttcgaggggagatgggtcgtc
tccaagaaggacgagtaccaaggtgtgtggaagcatgccaagagtgatggccatgaagac
tatggcctccttgtcagtgagaaggcaaggaaatacgccataatcaaggagcttgatgag
ccagttactttgaaggatgggacagtggtcctgcagtttgaagtgaggcttcagaatggc
cttgaatgtggaggtgcctacattaagtacatccgccctcaggatgctggatgggatgcc
aaggagtttgataatgagactccatacacaattatgtttggtccagataagtgtgggtca
accaacaaggttcatttcatccttaagcacaagaatcccaagactggaaagtatgttgag
catcacctcaaattcccaccttctgtcccatatgacaagctctctcatgtctacacggct
atcttgaagccagacaatgaggtcagaattttggtcgacggggaagaaaagaagaaggca
aacttcctttctgctgatgattttgagccagcacttatcccatccaagaccattcctgac
cctgatgacaagaagccagaggactgggatgagagagctaaaatccctgatccagatgca
gtgaaacctgatgactgggatgaggatgcccccatggaaattgtggatgaggaagccacc
aagcctgagggatggttggatgacgagcctgaggagattgatgatcctgaggcagccaag
cccgaggactgggatgatgaggaggatggtgaatgggaggcgccaaagattgacaaccca
aagtgtgaagaggcacctggatgcggtgagtggaagaggccaatgaagcagaatcctgct
tacaagggcaagtggcatgcacctatgattgacaaccccaactacaaggggatctggaag
cctcaggagatccccaaccctgagtactttgagcttgacaagcctgattttgatccaatt
gctgctattggtattgagatctggacaatgcaggatggcatcctgtttgacaatatcttg
attgctgatgatgagaaggttgccacctccattctggagaagacctggaagcccaagtat
gatgttgagaaggaaaaggagaaggctgaggaggctgctgctggtgcggatggtctttct
gagttccagaagaagatttttgacgtcctgtacaagattgctgatgttccgttcttggca
ccctacaagaccaagatcattgatgttatcgagaagggagagaagcagcccaacatcact
attggcattttggtctccgttgtcatcgtgttcgttactgttctcttcaggatccttttt
ggtggcaagaagccagcggtacctgtgaaacccgcagctgaggcgaagaagcccaaagcc
acagagaccgacggtgctggaagcagtggtgacaaggatgagaaagaggacgaaaaggag
gagacagcagccccacgtcggaggacccgcagggagacgtag
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