Sorghum bicolor (sorghum): 110436666
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Entry
110436666 CDS
T01086
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110436666
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
110436666
NCBI-ProteinID:
XP_021319794
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Position
6:47202756..47206762
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AA seq
710 aa
AA seq
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MSASSSSLCGGDPAMRSVVWFRRDLRVEDNPALAAAARAGGEVVPAYVWSPEEEGPYYPG
RVSRWWISQSLKHLDASLRRLGAGKLVTRRSADAVVALLQLVRDTGATHVYFNHLYDPIS
LVRDHRLKEMLAAEGIVVQSFNADLLYEPWEVVDDEGQPFTMFTAFWNRCLSMQYDPPAP
LLPPKKINSGDLSMCPSEDLIFEDDSERGSNALLARAWTPGWQNADKALTAFLNGPLADY
SVNRKKADSASTSLLSPHLHFGELSVRKVFHLVRMKQLVWSNEGNHAAEESCTLFLRSIG
LREYSRYLSFNHPSSHERPLLAHLRFFPWVVNESYFKIWRQGRTGYPLVDAGMRELWATG
WLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGSLPDSRELDR
IDNPQFEGYKFDPHGEYVRRWIPELVRLPTEWIHHPWDAPVSVLQAAGIELGSNYPLPIV
ELDAAKARLQEALSEMWQLEAASRATMNNGMEEGLGDSSEVPFPEELQMEVDRQRAQATA
NVVMTVRRREDQMVPTMTSSLNRAETEVSADLGNSEDTRAQVPFHAHFHPRVEREDMIQN
TEGPALRINGTHQHNIFQQPQNHRREALAPSVSEASSSWTGREGAVVPVWSPPAASGHSE
TFAADEADVSSRSYLDRHPQSHRLMNWSQLSQSLTTGWEVENSVQPNLLG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctcgtcctcgtccctgtgcggcggggacccggcgatgaggagcgtggtgtgg
ttccggagggacctcagggtggaggacaacccggcgcttgcggcggcggcgcgtgccggt
ggggaggtagtgccggcgtacgtctggtcgccagaggaagagggcccttattaccccggg
cgtgtgtcccggtggtggatcagccagagtctgaagcacctggacgcctcgctccgccgc
ctaggtgcaggaaagctcgtcacgcggaggtcggccgacgccgtcgttgcgctcctccag
ctggtccgcgacaccggcgccacgcacgtctacttcaatcatctatacgacccgatctca
ctagtcagggatcaccggttgaaggagatgctggcggctgagggcatcgttgtgcaatct
ttcaatgcggatctgctgtatgagccatgggaagttgtcgatgatgaagggcaaccattc
accatgttcactgcattctggaacaggtgcctcagcatgcagtatgatccccctgcacca
cttctgcccccgaagaagatcaattcaggtgacttatcgatgtgtccatcggaagatctg
atctttgaggatgattcagagaggggaagcaacgctcttctggcccgagcatggacacca
gggtggcagaacgcagacaaggcactgacagccttcctcaatggtccattggctgactac
tcagtgaaccgtaagaaggctgatagtgcgagcacatccctactctcacctcacctgcat
ttcggtgagcttagtgtgcgcaaggttttccacctagttcgtatgaagcagcttgtgtgg
agtaacgagggcaaccacgctgctgaggagagctgcaccttgtttctccgttccattggc
ctgcgggagtactctcggtacctgagcttcaatcacccaagcagccatgagaggcccctc
ttggcgcatctcaggtttttcccctgggtggtcaatgagagctactttaagatttggagg
cagggaaggactgggtacccgctcgttgatgctggcatgagggaactgtgggcgacagga
tggttgcatgaccggatacgtgtggtggtttcaagcttctttgtcaaggtccttcaactt
ccatggcgatggggtatgaagtacttctgggacacattactggatgctgatcttgaaagc
gatgcactgggctggcagtacatcactggctctcttcctgatagtcgagagcttgaccgc
atcgacaatccgcagtttgaaggctacaagttcgacccgcatggggagtatgtccgacgg
tggattcctgagctcgtaaggctgccgacagaatggatacatcatccatgggatgcacct
gtttccgtgctgcaagctgcaggaattgagctgggatccaactatcccctccccatagtt
gagctagacgcggccaaagccagactgcaagaagccctatcagaaatgtggcagctggag
gcagcatcaagggccaccatgaacaatggaatggaggaaggcctcggtgattcctcagag
gttccatttcctgaagaattacagatggaagtcgatcggcagcgagcccaggcaacagcc
aatgtggtgatgactgttcggaggcgtgaggatcagatggtgcctaccatgacctcttca
ttgaacagagctgaaacagaggtttccgccgatctagggaacagtgaggacactagggca
caggttccgtttcatgcacatttccatccccgagttgagagggaagacatgatccagaat
actgaaggccctgcacttagaatcaatggcactcaccaacacaacatctttcagcaacct
cagaatcataggcgagaagctcttgctccatcagtgtcggaggcttcaagtagctggacc
ggcagagagggcgctgtggtcccagtttggtcacctcctgcagcatcaggccattcagaa
acttttgctgctgatgaagctgacgtttctagtaggagttatttggataggcatccacag
tcgcaccggttgatgaactggagtcaattatcacagtcattgacaacaggctgggaagtg
gaaaattctgtgcagccaaacttactcggttag
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