Sorghum bicolor (sorghum): 110436881
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Entry
110436881 CDS
T01086
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110436881
03015 mRNA surveillance pathway
110436881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
110436881
03041 Spliceosome [BR:
sbi03041
]
110436881
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110436881
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
110436881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
110436881
NCBI-ProteinID:
XP_021320207
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All DBs
Position
1:70398804..70405873
Genome browser
AA seq
880 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPELDHLVDMSKVKMDVMKPWIAKRVTELL
GFEDEVLINFIYGLLEEKEADGKKIQIQLTGFMEKNTVKFMKELWSLLLSAQQNASGVPQ
QFLDEKEAEIQQKKAEDDRIAQEIQKKREKEAKDSELEKNKMTDGDAGNSRSFGDPVGSA
LNSTNFNADEEKDNDFKRSLRPKNRGSRRSRSISLSPRGRQRSISPRNNSRSPPRRSRSI
DRHRRSSRRSPSPRHSVSPRRHSPRTTTSISRRRSPYSRRGSPSLSRYPSPSSRRRSPRR
RKSPSSGPERSLSPRHRRSPARAPRRSPSPTSRRSPVRRRFSPGRRPSPSPARRRPRSPS
PGRRRPRSPSPGRRRPRSPSPRRRRLRSPSPGWRRPRSPSPGRRRPRSPSPGRRRPRSPS
PGRRRPRSPSPGRRRPWSRSPIRRRSPSPKRRRRSPSSPKTRSANRRSSPQGRRSITPKT
SRSPDRSRRSLSRDIEKETNGIPSIKDRDVHPRGQEQKSDDADRDVARIGGRHSPDSEHR
LSKSLRSPNYEERNSKRDSSFKNSGKHIPSQGSADTSGDEEGSRARENARKANSARRKTK
DFSAGLELKKVGAGDSSPREKSPFSLRQSGKGVQKKHPDQLSESSEDELVGTGIKRQTDS
PEDSHGKQCSPTRIENDATYSKDGRNSEHVMRGLRDDSDDAIDAKKYLSKVNEDSQLEDG
SPLKKTKKRTYGNSHNDSGSSGSEERDKHRSHSEKRRHKKAHKHKKQYDDSSESDSEPDG
KEAKKRRKEEKRLRKEERRRRREERYRRRAERHASKQKLKNTDTAAVPSDSEKDRDSDSD
VAVRKRGSHAGREESDQKKLEIELREKALETLRAKKAINN
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcttcttccgggggacgtccgctgaccaggacacgcgcttctccaacaag
caagccaagctgctcaagacgcagaagttcgcgcccgagcttgaccatctggtggatatg
tcaaaggttaagatggacgtgatgaagccctggattgccaagcgagtcactgagctcctt
gggttcgaggacgaggttctcatcaacttcatctatggcctcctcgaggagaaggaagcg
gatggaaagaagattcagatccagctgacaggtttcatggagaagaacacagtgaagttc
atgaaggagctctggagccttctcctcagtgcacagcaaaatgccagtggggtgcctcaa
cagtttctggatgaaaaggaggctgagatacagcagaaaaaggcagaggatgataggatt
gcacaggagatccaaaagaagcgagagaaagaggcaaaggactcagaactggaaaagaac
aaaatgacggatggggatgctggtaactcaagatcctttggtgatccagttggctctgct
ttaaatagtacaaatttcaatgccgacgaagaaaaagacaatgatttcaagcgcagctta
agaccaaagaacaggggaagtcgcagatccaggagcatatctttgtcgccacgcggtagg
caaagatctatttctcccagaaataattctcgttctcctcctaggcgttcccgctctatt
gatagacaccgtagatcatcacggcgttcaccttcacctagacattctgtttctccccga
aggcattctccaagaaccacaacttcaatttctagaaggagatcaccttactcaaggaga
gggtcaccttccttgtcaagatacccatccccatcttcacgccggaggtctcctcgtcgc
agaaaatcaccatcatctgggccagaaaggtcactttctcctcgccatcgtcgttcacca
gctcgtgcaccaaggagatcaccatctcctacaagtcgaaggtctcctgttcgacgcaga
ttctcaccaggtagacgtccatccccatccccagcaaggcgcaggccaaggtccccatct
ccaggaaggcgcaggccaaggtccccatctccaggaaggcgccggccaaggtccccatct
ccaagaaggcgcaggctacggtccccatccccaggatggcgcaggccacgatccccgtcc
ccaggaaggcgcaggccacggtccccgtccccaggaaggcgcaggccacggtccccgtcc
ccaggaaggcgtaggcctcggtccccatctccaggaaggcgcagaccatggtcgcgatct
ccaataagacgtcgatccccatctccaaaacgtcggaggagatcaccgagttcaccaaag
actcgttctgcaaatcggcgttcgtctccacagggaaggaggagtatcactccgaaaact
agcaggagtcctgatcgttctcgccggagtttaagtagagacatcgagaaagaaacaaat
ggcatcccctccattaaagacagagatgtgcacccaaggggccaagaacaaaaatcagat
gatgccgatagggatgttgcaaggattggtggtcgtcattccccagattctgagcataga
ttgtcaaaatccttgaggtctcctaactatgaagaaaggaactccaaacgtgatagctct
ttcaagaactcaggcaaacatatacctagtcagggcagcgcagatacaagtggagatgag
gaaggcagtcgtgctagagagaatgcccgaaaagcaaattcagctcgtaggaaaacaaag
gatttctcggcaggtctggaacttaagaaagttggtgccggtgactcaagccctagagaa
aaatctccattcagtttacgacagagtggcaagggtgtccagaagaaacaccctgatcaa
ctgtcagaatcatcagaagacgagcttgttggtacaggaataaagcgtcaaactgattca
cctgaagactctcatgggaaacaatgttcccctactagaattgaaaatgatgccacttat
tcgaaggatggtagaaacagtgagcatgtcatgagaggtttgcgtgatgattctgatgat
gctattgatgcaaagaaatatttatctaaagtcaatgaggactcccaattggaagatgga
agccctttgaaaaaaactaagaaaagaacatatggtaatagccacaatgattctggtagt
tcagggtctgaagaacgtgacaaacatagatcccactctgagaagcgaaggcacaagaaa
gctcataagcataagaaacagtatgatgatagttctgagtctgattctgagccagatggc
aaagaggcaaagaagagaaggaaggaagagaagaggctaagaaaagaggaaagacgtcga
agacgtgaagaacgataccgcagaagggcggaacgccatgccagcaagcaaaaattaaag
aatactgatactgctgctgtgccttcagactctgagaaggatcgggattctgattcagat
gttgctgttaggaaaagaggttctcatgctggcagagaagagtctgatcagaagaaacta
gaaattgaacttcgtgagaaggcccttgaaactcttagagcaaagaaagccatcaacaac
tag
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