Sorghum bicolor (sorghum): 110436957
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Entry
110436957 CDS
T01086
Name
(RefSeq) TBC1 domain family member 5 homolog B-like
KO
K18469
TBC1 domain family member 5
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
110436957
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110436957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF6277
Motif
Other DBs
NCBI-GeneID:
110436957
NCBI-ProteinID:
XP_021320470
LinkDB
All DBs
Position
7:63252817..63258202
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AA seq
803 aa
AA seq
DB search
MAEEERRRRFANLRSVRWRVDLGILPASPGASVDELRRAAADSRRRYVSLRRRLMVDPHL
PKEEDRSSNLVVDNPLSQNPDSSWGRFFRGAELEKTVDQDLSRLYPEDGSYFQTPNCQAM
LRRILLMWCLQHPECGYRQGMHELLAPLVYVLQVDIDKLSQVRKLHEDCFNDDFDGVPFP
DTDMVFSYKPRKDSKWHSEADNGDDSESASRVNTLDELDLDTKEIISLSDAYGAEGELGI
VLSERFMEHDAYSMFDGLMDGGSGVVRMAEFFSTSKVGSSSSLAPVIEASSSLFHLLSIV
EPSLHSHFIELDVEPQYFALRWLRVLFGREFCLNDLLVVWDEVFACSNDMLLGENEEYSF
KILCSTRGAFIAAMAVSMILHLRSSLLATEINTSCLQRLLNFPNNVDVHKLIEKAKSLQS
IAIDANVSSPPLLSKKDSCDYDRVYSNLATSTPPRTPLHPLAESYWEKQWRNLHNDGTVS
NDGTTPKESDKGLSYKRSLKQSLSQKLGLSRTESDPSPVKIVSVKSDTKNSVRRCLLNSY
SDKVVQSSEVAGKFQQDEFPIVSIHKDPLIDSPVKSVDESSTKRTEACSSGENSPVFYAA
CAGNEHENCNDNDSERSSITSNSCAGDDDRDEILPDESSSCNCEGKTVSEATTSETNVDP
VGSSERATVSNERKPFINKLQWFLRFGRPSTEGNAEKGIAQASNDKHDAVIPCPSPADVS
SDNSHGGINLASGDNKKVMGTLKNIGQNMLENIQVIESAFQQDRAQPSAMENFPNNILGG
KGQVTAMAALTELRKISNLLREM
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggagaggcggcggcggttcgcgaatctgcgcagcgtccggtggcgggtc
gatctcggcatcctgccggcgtcgcccggggcctccgttgacgagctccgccgcgccgcc
gcggattcgcggaggagatatgttagtttgaggcgccgccttatggtagacccacatctt
ccaaaggaggaggacagatcatccaaccttgttgttgataacccgctctctcagaaccca
gatagcagctggggccgtttcttcagaggggctgagttggagaagacagttgaccaagac
ttgtctcgattatatccagaagatggtagttactttcaaacacctaattgccaggccatg
ctgaggagaatactgttgatgtggtgccttcagcacccggagtgtggatatcgccaagga
atgcacgaactactagctcctctagtgtatgttcttcaagttgatattgataaactgtct
caagtgaggaagctccatgaggattgcttcaatgatgattttgatggagtgcctttccca
gatacagatatggtttttagttataaacctagaaaggactcaaaatggcattccgaagct
gacaatggcgatgattctgaaagcgcttccagagttaacactcttgatgagcttgacctg
gatacgaaagaaataatttcacttagtgatgcatatggagctgagggtgaactaggcatt
gtattgtctgaaaggttcatggaacatgatgcctattcaatgtttgatggtttgatggac
ggaggtagcggagtggtccgcatggcagagtttttctctacatccaaggttgggtctagc
tcaagtctagcgcctgtcatcgaagcctcatcatctttatttcacttgctttccattgtt
gagccatctcttcatagccatttcattgagctggatgtagaaccacaatatttcgctctt
cgttggctgcgggtcttgtttggacgagagttctgcctcaacgatcttttagtcgtatgg
gatgaagtttttgcttgctccaatgacatgctactgggagaaaatgaagaatacagtttt
aagatattgtgctcgactagaggggcattcatcgcagccatggcagtctctatgattctt
caccttagatcatctctgctggccactgaaatcaatacgtcatgtcttcagagattattg
aactttccaaacaatgttgatgtgcataaattaattgagaaagctaaatctctgcagtct
attgctattgatgcaaatgtatcatccccacctctcttatcaaagaaggatagctgtgat
tatgatagggtttacagtaatcttgctacttcaacccctccaaggactccgttgcatcca
ttagctgagagttactgggaaaagcagtggagaaacctacacaatgatggaactgtttct
aatgacggaactactcctaaggagagtgataagggtctttcttataaaagatcactaaag
caatctttgagccagaagcttggtttatctaggacagagtcagatccttctccagttaag
atagtcagcgtgaagagtgacaccaagaattcagtgagacggtgtcttttgaactcttat
tcagataaagtagtacagtctagtgaagttgctggaaaatttcagcaagatgaattccct
atcgtgtcgattcacaaggatccacttatagattcaccggtgaagtctgttgatgagagt
tcaacaaaaaggacagaagcttgctccagtggcgagaactctccagtgttttatgctgct
tgtgctggtaatgaacatgagaattgcaatgacaatgattccgagaggagtagcattact
tcaaattcctgcgctggcgatgatgatagagatgaaattttgccagatgagtcgtccagc
tgcaactgtgagggcaaaactgtctcagaagcaacaacgtctgaaacgaatgtagatcca
gttggatcctctgagagagctacagtatctaatgaaagaaagccatttatcaataagcta
cagtggttcttgaggtttggcagaccttcaactgaaggcaatgcagagaagggcattgct
caggcatcgaatgataaacatgatgcagttattccctgcccttcacctgctgatgtgagt
tcagataactcccacggcggcataaatttggcttctggtgataataagaaggtgatgggc
acactgaagaacattggacagaacatgcttgaaaatattcaggtgatcgaatcagcgttc
cagcaagaccgcgcacagccaagcgccatggagaacttcccgaacaacatcctgggaggc
aaagggcaggtcaccgcgatggctgccctgacagagctccgcaagatcagcaacctgctc
cgcgagatgtaa
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