Sorghum bicolor (sorghum): 110436958
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Entry
110436958 CDS
T01086
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
110436958
03036 Chromosome and associated proteins [BR:
sbi03036
]
110436958
Spliceosome [BR:
sbi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110436958
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
110436958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
TPR_14
Lsm_interact
ARM_TT21_5th
TPR_19
xRRM
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
110436958
NCBI-ProteinID:
XP_021320473
LinkDB
All DBs
Position
7:complement(1290960..1298351)
Genome browser
AA seq
842 aa
AA seq
DB search
MTTEEELPEAAEAAPEPAPAGAGGGDDAEMPDAAAPSGSDSDSSDSDSDDEGAAAADELR
IQALEKTLQEQPLDYETHVQYIQCLRKSGNIEKLRAAREEMNKYFPLTPKMWQEWAKDEI
SLSSSEESFGDIEKLYERGVQEYLSIKLWRDYLDYVEEHDQSVSQCTPSGLSKMRNLFES
AITAGGLHITEGSKLWAAYREYEMAILITIADANDEEREKQVQRIRTLFHRQLSVPLADM
ESTLAEYKSWEAEQGNANDPGADFDGVPSNVVSAYKKANDMYNERKQYEDQLSNAGTSEA
DKLQEFVKYIKFEESSGDPARVQVLYERAVSELPVSSDIWMGYTSYLDRTLKVPSVLRSV
YYRATRNCTWVGELWVHYLLSLERIRASEEELQHVFERAIQCSFSTIQEYLNIYLTRVHG
LRRRISDGLDFQLIRQTLTDAAEFLSPQLGINELLRLYAYWAKLEHSLGKDLSAARGVWE
NAIKKSGSVFEVWVQYISMEIEMGHVHEARSLYKRCYSKRFAGSGSEEICHSWIRFEEEN
GTLDDYDLAVKKVTPRLKELMTFKSQEEAKVEAYPNPNDNSNANDSSQKRKPSKMANKQQ
PPAKKRKENPPKSTMPSDDQGSNLQSGHSGAVTAVEVGEASREKVVASMEMKVDGDSQTG
KSSSNEPKPSFYNDKCTVFVSNIDLKANEDDLRRFFSDIGGATAIRLLRDRFTKKSRGLA
YVDFSDNKHLEAAVKKNKQKLLGKKVSIARSDPSKGKKSREAGQASQDNLPQSGGDDAKA
TGSSGPDNEVPKGDAKTTGKNTRFAPRAVVKTLGWTNKDEKKPDVTGELKSNEEFRNLLL
KK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggaagaggagctgccggaggcggccgaggcggcgcccgagcccgcgccagca
ggtgcaggaggcggggacgacgcggagatgcccgatgccgccgcgccgtcgggctccgac
tcggactcgtcggactccgactccgacgacgagggggccgccgccgccgacgagctccgc
atccaggccctagagaaaaccctccaggagcagccgctcgactacgagacccacgtgcag
tatatccagtgcctgaggaagtcaggcaacattgagaagcttcgtgcggcaagggaggag
atgaacaagtactttcctctcaccccaaagatgtggcaggagtgggctaaggacgagatc
tcattgagctcgagtgaagaatcttttggtgacattgaaaagctctacgagcgtggggtg
caagaatacctgtccatcaagttatggcgggattaccttgattatgttgaagagcatgat
cagtcggtgtctcaatgtacaccttctggcctctccaagatgagaaatttgtttgaaagt
gctattactgcaggggggctgcatattactgagggtagcaaactatgggcagcttataga
gaatatgagatggccattttgatcaccattgctgatgccaatgatgaggagagggaaaag
caagttcagcgtatacgcacgctattccaccgccagttatctgttcctttggctgatatg
gaatcaacacttgctgagtataagagctgggaggccgagcaagggaatgcaaatgatcca
ggtgcagattttgatggtgtcccctcaaatgtcgtatctgcttacaaaaaggccaatgat
atgtacaatgaaaggaagcaatacgaggatcaactaagcaatgcaggcacatctgaagct
gacaaactgcaggaatttgtgaaatacatcaaatttgaggagtcttctggtgatcctgct
cgtgttcaagtcctgtatgagcgagctgtttcagagcttcctgtttcaagtgatatatgg
atgggatatacaagttacctggatagaaccctgaaggtgccttctgtactcagaagtgtt
tattacagagccacaagaaattgtacatgggttggtgagctatgggtccattatttgttg
tctttggagcgtatccgtgcttctgaagaagagctgcagcatgtatttgaacgggcaata
caatgttccttttcaaccatacaagagtatctcaatatttatcttactcgagttcatggt
ttaagacgaaggatttctgatgggttggattttcaactgattaggcagacattaacggat
gctgcagaatttctctcacctcaactgggtatcaacgagttactgcgcttatatgcttat
tgggccaaactagagcatagtcttggcaaagatctttctgcagctcgtggagtttgggaa
aacgcaatcaagaaaagtgggtctgtttttgaagtttgggtgcagtacatttcaatggag
atagaaatgggccatgtacatgaggcgagatccctttataagcgttgttatagcaaaaga
tttgctggttctggatcagaggagatatgtcactcatggataagatttgaagaggagaat
ggcaccttggatgattatgaccttgctgttaagaaggttacccctcggctaaaggagctt
atgacgttcaagtctcaagaggaggctaaagttgaggcataccctaaccccaatgataat
tctaatgcaaatgattcctctcagaaaagaaaaccaagtaaaatggccaataaacagcag
ccccctgctaagaaaagaaaagagaatccaccaaaaagcaccatgccatcagatgaccaa
ggatcaaatttacaaagtgggcacagtggtgctgttactgctgtagaggttggagaggcc
agcagggagaaggtcgtggcatctatggagatgaaagtggacggtgacagccaaacaggg
aaatcaagttcaaatgaaccaaagccatccttctataatgacaagtgtacagtttttgtg
tcaaatattgacttgaaggcaaatgaagatgatctcagacgattcttctctgacattggt
ggtgccacagcaataagattgctgagggacagattcacaaaaaaatcaagggggttggcc
tatgtggatttttcagacaacaagcatcttgaggcagctgttaagaaaaacaagcagaag
ttgcttggaaagaaagttagtattgcacgatcagatccaagcaagggtaagaagagccgc
gaagcaggtcaagcaagccaggataatttacctcagagtggcggtgatgatgcaaaagca
acaggatccagtggaccagacaatgaagtacctaagggtgatgcaaaaaccacggggaag
aatacccgttttgcaccacgagctgtggttaaaactcttgggtggaccaacaaggatgag
aagaaaccagatgtcacaggggagttgaagtcaaatgaggagttccgaaatctgttactg
aagaagtga
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