Sorghum bicolor (sorghum): 110436972
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Entry
110436972 CDS
T01086
Name
(RefSeq) pumilio homolog 5-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NTS_2
Motif
Other DBs
NCBI-GeneID:
110436972
NCBI-ProteinID:
XP_021320530
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All DBs
Position
7:63354281..63362458
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AA seq
1044 aa
AA seq
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MVDKAKVVGAPGETGHAFCWESFGRMTTGGGAGDLLPRVSGQPTDLEAASLMATESAVRL
IGGTGARDWSKGFGAFDSSVGGLSGEDLGFVDNGTGVYGGWSKSVPNRSGSAPPSMEGSL
AALGHLIGQQSGSFEASLATLDNITDSSKSEEQLRADPAYFEYYGSKVNLNPRLPPPLIS
RESRRLMNRVGKAKEWRVVSQDNSSKGSIYVPRSTLSTHKEEPEDDKSPRLDSSSVEDAQ
IISSASNFQSQDFSLESFQQNAASLPDSSSSNPSNSNTGDSMPVYSDINLSRSLSVDAVK
QSDLNSWKSKNPLKSNVSSDLSSPPLPSSSYSGSKTGMQTSQQEKAAVDTKHGNVVLGSG
AAVTELDNVDSSMKNLKLSLDGHTSSPVKQRWQDNVLQQYGSFLQAQGDPIQMTTQGPHL
PHIPFVDNLSHAQLKLPAGDLHQFLPQPSMTTPFYTPNSFGNPYYQNLHPANAFPTSIGT
GGYAVSGSILPPFMAGYAPQGPLGTPLDSPMTPSFSGRPSGFPPAGNLTGGTDFMQSYKV
YGQLGAGMQSSIPDPNFIHFFQHPSLFQYTSGNQYNTMGPRFTVVGNPAESFDPQKMIPQ
AAYPSDQRLPLPRTGFPNSTTPRRGTVPNYQGISSYVGVPMTYPTSPVFQGQTLPGVLPP
GRRNDSVGFQSPSRNITDSPGIQGQRERQKFDESKTCSFLEELKSNRARRVELSDITGRI
VEYSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTREQ
RRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIDLVHELDGHVMRCVRDQNGNHV
IQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGNSQGQCIIDEILQS
ACILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKFASNVIERCFQHGDIA
ERDLLIRQIVEQTEGNDNLLAMMKDQYANYVVQKILETCNENQRELLLSRVKGHMQALRK
YTYGKHIVSRVEQLCGDGTAESDS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggtggataaggccaaggtggttggtgcccctggagaaacggggcatgccttttgttgg
gagagctttgggaggatgactacaggtggtggcgctggtgatttgttgcctagggtttct
ggccagccgactgacttggaggcagcaagtttaatggctactgagagtgctgtccgatta
attggtgggacaggggctagggactggagtaagggatttggtgcatttgactcttcagtg
ggtggcctttcaggggaagatttaggatttgtggataacggcactggggtttatgggggc
tggagcaaatctgttccaaatcgcagtggaagcgcaccacctagcatggaaggatctctt
gctgctcttggccatctcattggccagcagagtgggagctttgaagctagtttggcaacc
ttggataacataactgacagttcgaagtctgaggagcaactacgtgctgatccagcatat
tttgagtattatggctccaaggtgaatctgaatccaaggctccctccgccacttatttca
agagagagccgccgattaatgaaccgtgttggcaaggctaaagagtggagggtagtctcc
caagataacagcagcaaaggctcgatatatgttcctcgatctacactgtcaactcacaaa
gaagaaccggaggatgataaatctccaagattggattcaagttcagtggaggatgcccag
attatctccagtgcatccaactttcagagccaggattttagtctggagagctttcaacag
aatgctgcttctttgcctgatagttcatcttctaatccttcaaatagcaacactggtgat
tctatgcctgtatattctgacataaatttgtcaaggagtttgtcagttgatgctgtcaag
caatcggacctgaactcttggaaatcaaaaaacccactgaaaagtaatgttagcagtgac
ctttcatcgccgccccttcccagttcatcatattctggtagcaaaactggtatgcaaact
tctcagcaagaaaaggcggctgtagacaccaaacatggaaatgttgtgcttggcagtggt
gcagctgttactgaacttgataatgtggactccagtatgaagaatttgaagttaagtttg
gatggccatacatcctcacctgtgaagcagaggtggcaggacaatgtcttgcagcagtat
ggctcctttctccaagcccaaggtgatcctattcaaatgactactcaaggaccccatctt
ccccatataccttttgttgataacttgtctcatgctcagctcaagttacctgctggtgac
ttgcaccaatttttaccgcagcctagtatgacaacacctttctatacaccaaattctttt
ggaaacccttattatcagaatttgcaccctgctaatgcttttccaacctcaattggaact
ggtgggtacgctgtaagtggttccattttgccaccttttatggctggctatgctccccaa
ggtcctcttggtacacctcttgacagtcctatgactccaagctttagtggcaggccatct
ggatttcctccagcagggaatcttacagggggaacagattttatgcagtcatataaagta
tacggacaacttggggctggtatgcagtcgtccattcctgatccaaacttcattcatttc
tttcagcatccctctttatttcagtatactagtggaaatcaatacaatacaatgggtcca
agatttactgttgttgggaatccagctgaaagctttgatccacaaaagatgataccgcaa
gcagcatatccatctgatcagaggcttccacttccaagaactggctttcctaattctact
acacccagaagagggactgttccaaattatcaaggcatatcatcctacgttggagtgccg
atgacttatcctacaagtccagtgtttcagggacaaacgttgcctggagtattgcctcct
ggtaggagaaatgactctgttggatttcagtccccctcaagaaatatcactgatagtcct
gggattcaagggcagcgagaaagacagaagtttgatgaatcaaagacctgctctttctta
gaagagttaaagtccaacagagcacgcagggttgagctatctgacatcacaggtcgtata
gttgaatacagtgctgaccaacatggtagccgattcatccagcagaagttggaaaactgc
actgccgaagagaaggcagctgtgtttgcggaggttcttcctcatgcttcatcattaatg
actgacgttttcgggaattacgtgatccaaaagttttttgaacatggaactcgtgagcaa
aggagggatcttgccaccaaacttgttggtcatgttttgcctttgagtcttcagatgtat
ggctgccgtgtaattcagaaggctcttgaagttatggaacttgaccagaaaatagatcta
gttcatgagcttgatggacatgttatgcgatgtgtccgtgatcaaaatggaaatcatgtt
atacagaagtgcattgagtgtgtccccacagaacatattggttttgtagtatctgctttt
cagggacaagttgctagcctttcaatgcacccatatggttgccgtgtaattcagagagtt
ttggagcattgcggtggtaactcacaagggcagtgcataatagatgaaatattgcagtcg
gcgtgcatccttgcgcaagatcagtatggcaactatgttacacagcatgttctagaaaga
ggaaaagctcatgagaggagccaaattattactaaattggctgggcaggttgttaccatg
agccaaaataaatttgcatcaaatgtgatagagaggtgttttcaacatggtgatattgcg
gagcgggatcttctgatcaggcagattgtggagcagacagagggcaatgacaatttgctg
gcaatgatgaaggaccagtatgctaattatgtggttcagaagatacttgaaacatgcaat
gagaatcagcgggaactcctgctcagccgtgtaaagggtcatatgcaagcattgaggaag
tacacatacggcaagcacattgtaagccgagttgagcagctctgtggtgatggaactgcc
gagtcggattcttga
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