Sorghum bicolor (sorghum): 110437539
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Entry
110437539 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC110437539
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Retrotrans_gag
RVP_2
Asp_protease_2
gag-asp_proteas
Ty3_capsid
Asp_protease
Motif
Other DBs
NCBI-GeneID:
110437539
NCBI-ProteinID:
XP_021321685
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All DBs
Position
8:21036077..21038980
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AA seq
967 aa
AA seq
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MAEPTTADLLKELKTMSHELTSLKADMAATKDKASTADSSDTWHREGFRDLNLPPWPKKW
DFPRYDGTPDPLLFLNKFEAYFRHHCTMAEERMGMASYHLDDAVQTWYTQLLEDEGAPTW
GRFKELLNLRFGPPLRSAPLFELAECRRTGTVEEYSNCFQALLPRAGRLDESQRVQLFTG
GLLPPLSHAVRIHHPETLSAAMGLAGQVELMERDRLPPPTARAPPRGLLPAPAPRAALPA
PAPQLALLAPPAAAPPGRDAANPRCLTPEEMAERRHLGLCFNCNEKYTRGHNRFCRRLFF
LDGVEIDDVAPTDDAAAAAEDVEAPVFSLDAVAGVPIADTIKLPVNVGDADLLALLDGGS
THSFIGEEAARRAGLPIQSSPRISAVVANGERVACPGVIRNAAFTIHGATFHTDLFVMPL
AGFDVVLGTRWLGTMGPIVWDFASRLMAFQRDGHHFAWTGVASPSTAHLRTLAAASGALQ
DELLVAYEDVFGEPTGLPPPRGRDHAIILKSGSAPVAVRPYRYPAAHKDELERQCATMIV
QGVVRRSDSPFSSPVLLVKKADGSWRFCVDYHALNALSVKDAFPIPVVDELHGARFFTKL
DLRSGYHQVRMRPEDVHKTAFRTHDGLYEFLVMPFRRCNAPATFQVLMNNVLRPLLRRFV
LVFFDDILIYSESWTDHLRHMQTILSVLRQHQLFVKRSKCTFGAPSVSYLGHVISEAGVA
MDPAKVQAIHEWPVPRSARAVRSFLVLAGYYRKFVHNYGALAAPLTALTKKDGLSWTADA
AAAFDALKAAVTAAPVLAMPDFTKPFTVQCDASTSGFGAVLVLEGHPLAFFSRPVAPRHR
ALAAYERELIGLVHAVRHWRPYLWSRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGF
DFAVEYKSGAANVVADDLSWHDTEEGTVLALSAPPFDFIGKLHAAQRQDPAFTALHDEVS
AGTRTGP
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctaccactgccgacctcttgaaggagctcaagaccatgtcccacgaactc
acatccttgaaggccgatatggcggccacgaaggacaaagcctcgacggccgacagctct
gacacatggcatcgtgaggggtttcgtgacctcaacctccctccctggcccaagaagtgg
gattttccccgctacgacggcacccccgatccgctcctcttcctcaacaaattcgaggcg
tacttccgccaccactgcaccatggctgaagagcgcatgggcatggcgtcttaccacctg
gacgatgccgtgcagacctggtacacgcagctgcttgaagatgagggtgctccgacgtgg
ggacgtttcaaggaactcctgaacctacgtttcggaccacccctgcgttcggccccgctc
ttcgaacttgcggagtgcaggcgcacgggaacggtggaggagtactccaactgtttccag
gccctcctgccacgtgctggccgtctcgacgaatcccagcgagtccagcttttcacgggt
ggtcttctgccgcctctcagccacgccgtccgtattcaccatccggagacgctgtccgcc
gcgatgggcctggcaggccaggtggagctgatggagcgcgatcggctgccgccaccaaca
gcacgagccccgccgcgtgggctgttaccggcaccggcgccacgggccgcgctgcccgcg
cccgcgccgcagctggccttgctggctccaccagcggctgcaccaccgggtcgcgacgca
gccaacccccggtgtctgacaccggaagagatggcggaacgacgtcacctaggtttgtgc
ttcaattgtaacgaaaaatacacccgtggccacaacaggttttgccgtcgcctcttcttc
cttgacggggtggagattgacgacgtcgcgcccacggacgacgcggcggccgccgctgaa
gacgtggaggcgcccgtgttctccttggatgcggtcgcgggcgtgcccatcgcggacacg
attaagctaccggtgaatgtcggcgacgccgatctcctcgccttgctagatggaggctcg
acgcacagcttcattggcgaggaggcggcgcggcgcgcgggcctcccgatccagtccagc
ccccgcatttcggcggtcgtcgccaacggcgaacgcgtggcctgtcctggggtcattcgg
aacgcagcgttcaccatccacggcgcaaccttccacaccgatctctttgtgatgcccctc
gcaggtttcgacgtggtgctcggcactcggtggctcggcactatgggccccatcgtctgg
gatttcgcctcccggttgatggcgttccagcgcgatggccaccacttcgcctggacgggc
gtggcttcaccctcgacagcgcacctgcgcaccctcgccgcggccagtggggcgctccag
gacgagctcttggtcgcctatgaggacgtgttcggcgaaccgacgggcctcccacctcca
cgtggccgcgatcacgccatcatcctaaagtcgggctccgctcccgtcgccgtgcgccct
taccgctaccccgcggcacacaaagacgagctggaacgccagtgcgccacgatgatcgtg
cagggcgtagtccgccgcagcgactcaccgttctcctcaccggtcttgctcgtcaagaag
gcggacggctcctggcgtttctgcgtggattaccacgccctcaacgccctcagcgtcaag
gacgcattcccgatccccgtcgtcgacgagctccacggcgcccgcttcttcaccaagctc
gatctgcggtcgggatatcatcaggtgcggatgcggcccgaggacgtccacaagaccgcc
ttccgcacccacgacggcctctacgagttcctcgtcatgccgttcaggcggtgcaacgcc
ccggcgacgttccaggtgctgatgaacaacgtgcttcgaccactccttcgccgtttcgtg
cttgtcttctttgacgacattttgatttacagtgagtcgtggaccgaccacctccggcac
atgcagaccatcctctctgtgctccgtcagcaccagctgttcgtgaagcgcagcaagtgc
accttcggcgccccctccgtctcatacctcggccacgtcatctccgaggcgggcgtcgcc
atggatccggccaaggtgcaggcgatccacgagtggccggtccctcgttcggcacgggcg
gtgcgcagcttcctcgtcctcgccggttattaccggaaattcgtccacaactacggcgcc
ctcgccgctccactgacggccctcaccaagaaagacgggttgtcctggactgcggacgcc
gccgctgccttcgacgcccttaaggcagcggtgacagcagcgcccgtcctcgccatgccc
gacttcaccaagccgttcaccgtccagtgcgacgcgtccacctccgggttcggtgcggtg
ctggtcctcgagggccaccccctggcgttcttcagccgtcccgtggctccacgccaccgc
gccctcgctgcctacgaacgggagctgatcggcctggtgcatgccgtccgtcattggcgg
ccgtacctctggagccggcgcttcgtcgtcaagaccgatcactactccctcaagtacctt
ttggatcagcgcctcgccaccatcccccagcatcattgggtgggcaagctgttgggcttc
gacttcgccgtggaatacaagtcgggcgcggcgaacgtcgtggctgacgacctgtcatgg
catgacacggaggagggcaccgttctggccctctcggcgcctcccttcgacttcatcggc
aagctgcatgctgcgcagcgccaggacccggcgttcactgccctccatgacgaggtcagc
gccggcacgcgcacagggccctag
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