Sorghum bicolor (sorghum): 4549223
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Entry
4549223 CDS
T01086
Symbol
rpoA, SobiCp055
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4549223 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
4549223 (rpoA)
03400 DNA repair and recombination proteins [BR:
sbi03400
]
4549223 (rpoA)
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4549223 (rpoA)
Transcription machinery [BR:
sbi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
4549223 (rpoA)
DNA repair and recombination proteins [BR:
sbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
4549223 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Tubulin-binding
Motif
Other DBs
NCBI-GeneID:
4549223
NCBI-ProteinID:
YP_899439
UniProt:
A1E9V6
A0A921REN1
A0A109NDW7
LinkDB
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Position
Pltd:complement(77006..78025)
Genome browser
AA seq
339 aa
AA seq
DB search
MVREEITGSTQKLEWKCVESRVDSKRLYYGRFILSPLRKGQADTVGIALRRALLGEIEGT
CITRAKFGNVPHEYSTIVGIEESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQD
IILPPSVEIVDTAQPIANLREPIDFCIELQIKRDRGYHTELRKNSQDGSYPIDAVFMPVR
NVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFIHTEEEGTSFE
ESKNRLTPPLLTFQKRFTNLKKNKKGIPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLS
KTEEDLMRINSFRMEDGKLIWDTLEKHLPIDLPKNKFSL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagaagagataacaggatccactcaaaaactagagtggaagtgtgttgaatca
agagtagatagtaaacgtctttattatggtcgtttcattctgtctccgcttagaaagggg
caagcggatactgtcggtattgccttgcgaagagctttacttggagaaatagaaggaaca
tgtatcacacgcgccaaatttgggaacgtgccacatgaatattccacaatagtaggtatt
gaagaatccatacaagaaattttactaaatttgaaagaaattgtattgagaagtaatctc
tatggagttagagacgcatcaatttgcgtcaaaggtcctagatacataaccgctcaagat
ataatcttaccgccttccgtagaaatcgttgatacggcacaacctatagctaacttgaga
gagcccattgatttctgtattgagttacagatcaagagagatcgcggatatcatacggaa
ctcagaaagaactctcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aatgtgaattatagtattttttcttgtgggaatggaaatgaaaaacacgagatacttttt
ttagaaatatggacgaatggaagtttaactcctaaagaagcgctttatgaagcttctcgt
aatttgattgatttatttcttccttttatacacacggaggaagagggcactagtttcgaa
gaaagtaaaaacaggttaactccaccccttttaacctttcaaaaaagattcactaatcta
aagaaaaacaaaaaaggaattccattgaattgtatttttattgatcaattagaattgcct
tctagaacgtataattgtctcaaaagggccaatatacatacactattggaccttttgagt
aagactgaagaagatcttatgcgaattaatagttttcgtatggaagatggaaaactgata
tgggacactctagagaagcatctcccaattgatttacctaagaacaagttctcgctttaa
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