Sorghum bicolor (sorghum): 8054310
Help
Entry
8054310 CDS
T01086
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3
KO
K14026
SEL1 protein
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8054310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_3
TPR_27
Motif
Other DBs
NCBI-GeneID:
8054310
NCBI-ProteinID:
XP_002468152
UniProt:
C5WQS5
LinkDB
All DBs
Position
1:complement(71010349..71019486)
Genome browser
AA seq
681 aa
AA seq
DB search
MARVLHRRLLLLAAVTFAVAASLLRPAAAVRPFVLVLSGEDFLKDSATAHPSLPSADSAD
DDGWDDFADDSPAADPLLSPSSWVPLLDPTSPPPSGDETDSPADGLFVAGARAMLSAASD
GDDAAFATAAAQIEAAAEAGHPGAQSALAFLTGAGMTRPASRSLAFLLHKFAADAGDLQS
KMALAYSYFRQEMYEEAVILYAELAEAALTSSLISKEPPVIEPIRLHSGTEENKEALRKS
RGEDDEDFQITEYQAQRGNAAAMYKLGLLYYYGLRGLRRDYGKAFHWFSKAVEKGETRAS
ELLGEIYARGAGVERNYTEAYKWLAFAAKQQHYSAYNGLGYLYVKGYGVEKKNLTKAREL
FELAAENKEAGGHYNLGVLYLKGIGVKRDVIRACNLLLHAVNAGQPKAIYQVAKLFQKGI
GLKRNLHMATMLYKSVAERGPWSSLSRWALESYLKGDVGKALLLYSRMADLGYEVAQSNA
AWILDRYGDQSICMGESSYCTDMERHLRAHALWWQASEQGNEHAALLIGDAYYYGRGVAR
DYERAAEAYMHARSQSNAQAMFNLGYMHEHGHGLPLDLHLAKRYYDQAVEVDSAAKLPVM
LALTSLWLRKNYADSFLVNFIDSLPEIYPVVKEWVEDVLMDEGNATILTLFACLVTVLYL
RERQRRQVAAANPQQPDDVAM
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtcctccaccgccgtctcctcctcctcgccgccgtcaccttcgccgtggcc
gcttctctccttcgcccagctgccgcagtgcgcccctttgttttggttctctccggtgag
gatttcctcaaggattcggcaaccgcgcacccgtccctcccctctgccgactccgccgac
gacgacgggtgggacgacttcgccgacgattcgccggccgccgacccgctcctctccccg
tcatcctgggtccccctcctcgacccaaccagccctcccccctctggcgatgagacggac
tcgcctgccgacgggctcttcgtggcgggcgcccgcgcgatgctctccgcagcgtccgac
ggggacgacgcggcgttcgccacggccgccgcgcagatcgaggccgcggcagaggcgggg
cacccgggcgcgcagtccgcgctggcgttcctcaccggcgccgggatgacgcgcccggca
tcccgatcgctcgcgttcctgctgcacaagttcgccgccgacgcgggagatctccagtca
aagatggccctcgcgtactcctatttccgccaggagatgtatgaagaagctgttatacta
tacgctgaacttgcagaagctgccctaacaagctccttgatatcaaaggagccaccagtg
attgaaccaatccgtcttcacagtgggactgaagaaaataaagaggccttgaggaagtca
cggggtgaggacgatgaagatttccaaatcacagagtaccaggcacagcgaggcaatgct
gctgccatgtacaaattagggcttctgtattactatggactacgtgggctccgtcgtgat
tatggaaaagcatttcattggttttctaaggctgttgagaaaggcgagacacgagcatcg
gagcttctgggtgagatctatgctagaggtgctggagtggaaaggaactataccgaagca
tacaagtggttggcatttgctgcaaagcagcaacattactcagcttacaatggattgggt
tatctttatgttaaaggctatggggtggagaagaaaaacttgacaaaagcaagggagctt
tttgaacttgcagctgagaataaggaagccgggggacattataaccttggtgtgttgtat
cttaagggtattggcgtaaagagggatgtaattagagcatgcaatctcttgcttcatgca
gttaatgctgggcaaccaaaagctatttatcaggtggcaaagctgttccagaaaggcatt
ggtcttaagaggaatctccatatggcaacaatgctgtacaagtctgttgctgagagggga
ccctggagttcactgtccagatgggctctggagtcttacttgaaaggtgatgttggaaaa
gcattgctcttgtattccagaatggcagatcttggatatgaggttgcacagagcaatgct
gcctggattctggataggtatggtgatcaaagtatttgcatgggagaatctagttattgc
acagatatggaaagacatcttcgtgcacatgctttgtggtggcaagcatccgagcagggt
aatgagcatgctgctttgttgattggcgatgcctactactatggtcggggcgtagcaagg
gactacgaacgtgcagcagaggcatatatgcatgctcggtcacagtctaatgctcaggct
atgtttaaccttgggtacatgcatgagcatggtcatggacttccccttgatttgcacttg
gcaaaaagatattatgatcaagctgttgaggtggattcagctgctaaactccctgtcatg
cttgcactaacaagtttgtggctaaggaagaactatgcagacagttttttggttaatttt
atcgattcacttccagaaatataccctgttgttaaggaatgggtggaagatgttctcatg
gatgaagggaacgcaacaattttgactctctttgcttgccttgtaactgtcctctacttg
cgggagcgtcaaaggcgtcaagttgcagcagccaacccccaacaacctgatgatgtggcc
atgtaa
DBGET
integrated database retrieval system
