Sorghum bicolor (sorghum): 8054346
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Entry
8054346 CDS
T01086
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8054346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8054346
03110 Chaperones and folding catalysts [BR:
sbi03110
]
8054346
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8054346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8054346
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8054346
Messenger RNA biogenesis [BR:
sbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8054346
Chaperones and folding catalysts [BR:
sbi03110
]
Heat shock proteins
HSP60 / Chaperonin
8054346
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8054346
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8054346
Exosomal proteins of other body fluids (saliva and urine)
8054346
Exosomal proteins of breast cancer cells
8054346
Exosomal proteins of colorectal cancer cells
8054346
Exosomal proteins of bladder cancer cells
8054346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8054346
NCBI-ProteinID:
XP_021306826
LinkDB
All DBs
Position
1:71619148..71623092
Genome browser
AA seq
588 aa
AA seq
DB search
MSRMAPPSPPLSMKPPTLPFSPPKKPPPMPVYKDLHFNRDLSATKKLQAGVDLVARLLGV
TLGPKGRNVVLGNKYGPPKIVNDGETVLKEIELEDPLENLGVKLVRQAGARTNDIAGDGC
TTSIILAQGLIAEGMKVLAAGINPVQVARGIEKTAAALVSELRLMSREIEDHEIAHVAAI
SAGNDYAVGNMIYDAFQRVGRKGMVRIENGRGTENSLEVVEGMQFERGYLSPYFVTNRGN
MTVEFTDCLILLVDKKISDASEIIRILDSAVKENYPLLIIAEDVEEQAMADLIKNKLKGT
IKVAAVKAFSFGEQKTQCLDDIAIMTGGTLVRDDMGHELEMAGKEVLGFASKVVITKDST
LIVTDGSNRQAVEERVTMIKGQIENSKERYNKKILGERIARLCGAIAIIQVGAQTIIEMK
DKKLRIEDALNATRAAIEEGVVVGGGCSLLRLSEKIDAIKESSLDNIEQEVGADIFKQAL
SYPTSLIANNAGVNGDFVIKKVLLNDNANYGYNAAKNCYEDLMAAGILDASKVVRCCIEH
AAVVAKSFLTSDVVIVEAKEGKPIRIRPPMPPRNLIPPMPPSISGIRV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggatggcgcccccgtctccacctctgtccatgaagcccccgacgctgcccttc
tctcctcccaagaagccaccgccgatgccggtgtacaaggacctgcacttcaaccgcgac
ctctccgccaccaagaagctccaggccggagtggacctggtggcgcggttgctgggggtc
accctggggcccaaggggaggaacgtcgtgcttggcaacaagtatggccctcccaagatt
gtcaatgatggggagaccgtccttaaggagatcgaattggaagatccattagaaaatctt
ggagtgaagctggtccgacaggctggagcaaggaccaatgatattgcaggagatggttgt
accacatccataatccttgctcaaggcctcattgctgaaggaatgaaggttcttgcagct
ggaatcaacccagttcaggttgcacgtggcattgagaagactgctgctgctttggtgtct
gaactcagactgatgtcgcgagagattgaagaccatgaaattgcacatgtggctgcaatt
agtgcgggaaatgattatgctgttggaaatatgatttatgatgcttttcaaagagtaggt
agaaaaggaatggtgagaattgaaaatggaagaggcaccgagaacagtctggaggttgtg
gaaggaatgcaatttgaacgcggttacctctctccttactttgttaccaatcgtggtaac
atgacggtggagttcactgactgtctgatactattggttgacaagaaaattagtgatgct
agtgagattataaggatacttgacagtgctgttaaagaaaattatccgttgttaataatt
gctgaggatgtggaagaacaagcaatggctgatttgataaaaaacaagctgaaagggaca
attaaggttgcagcagttaaggccttctcttttggggaacaaaagactcagtgcttggat
gacattgcaataatgacaggaggtacactagtgagggatgacatgggacatgaactagag
atggcaggaaaagaggttcttggttttgcttctaaggttgtaataacgaaagattcaacg
ctaattgttaccgatggaagcaatcgtcaagcagttgaggaaagggttactatgataaaa
ggacaaattgagaactctaaggaaaggtacaacaagaagatattgggtgagaggatagca
aggttatgtggtgcaattgcaatcatccaggttggtgctcaaacaatcattgagatgaaa
gataagaagctgaggattgaagatgcactcaacgcaacaagggcagctattgaggaaggt
gttgtagttggtggtggatgtagcctattaagactgtcagagaagattgacgcaatcaag
gaatcatcattggataatatagagcaggaggttggtgctgacatcttcaaacaagccttg
agttaccctacctctctaatagcaaacaatgcaggggtgaatggcgactttgtcattaaa
aaggtgttactgaatgataatgcaaattatggttacaatgctgccaagaactgctatgag
gacttgatggctgctggaatactggacgcatcaaaggttgtgaggtgttgcattgagcat
gctgctgtggttgctaagtcctttctcacctccgatgtggtgattgttgaggcaaaagaa
ggcaaacctattcgaataagacccccaatgcctcctaggaacttaattcccccaatgccc
ccttcaatttcaggtattcgagtgtag
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