Sorghum bicolor (sorghum): 8054389
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Entry
8054389 CDS
T01086
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8054389
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
8054389
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
8054389
NCBI-ProteinID:
XP_002455960
UniProt:
A0A921REY2
C5XR29
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Position
3:55755607..55762179
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AA seq
558 aa
AA seq
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MAIECLVLGAGQEVGKSCVVVTIGGKRVMFDCGMHMGYHDHRHYPDFARALAAWGAPDFT
TAISCVVITHFHLDHIGALPYFTEICGYHGPIYMTYPTKALAPFMLEDYRKVTMDQRGEE
EQYSYEDILRCMKKVIPMDLKQTIQVDKDLVIRAYYAGHVIGAAMIYAKVGDAAMVYTGD
YNMTPDRHLGAAQIDHLKLDLLITESTYAKTIRDSKHAREREFLKAVHKCVSGGGKVLIP
TFALGRAQELCMLLDDYWERMDLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHAVHN
PFDFKHVCHFERSFINNPGPCVLFATPGMISGGFSLEAFKKWAPSEKNLITLPGYCVSGT
IGHKLMCGKPTRIDYKDIHIDVRCQIHQLAFSPHTDSKGIMDLTEFLSPKHVILVHGEKP
QMAFLKERIESELGMPCYYPGNNESVSIPTTQNLKMSATERFITSCAVEQGKRSLHKRNL
ICGTGLSEVIGSDEEAAEGILLMEKHKSPKILCEDELLEVLGMEQHLVQFEPMVSRIVAD
VESELQRAKAADLDSDGK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgagtgcctcgtgctaggggcggggcaggaggtggggaaaagctgcgtggtg
gtgaccatcggcgggaagcgcgtcatgttcgactgcggcatgcacatgggctaccacgac
caccgccactacccggactttgcgcgcgcgctcgctgcctggggagcgcccgacttcacc
accgccatctcctgcgtcgtcatcacgcatttccacttggatcatatcggggcgctgccc
tacttcactgagatctgcgggtaccacggccccatctacatgacgtatcctacaaaggct
ttagctccatttatgctcgaggactatcggaaagtaacgatggatcagagaggggaggaa
gagcaatatagctatgaagatattcttaggtgtatgaagaaagtcataccaatggacttg
aagcagactattcaagtagataaagacctagtgatccgtgcctattatgctggacatgtt
ataggggctgccatgatttatgcaaaagttggggatgctgctatggtttacaccggggat
tacaatatgacaccagatagacatcttggggccgcacaaattgatcacctgaagttggat
ctcttgataacagaatcaacatatgctaaaactatacgtgactcaaagcatgcccgagag
agggagttcttaaaagcggtacataaatgtgtttctggtggaggtaaagttctaattcca
acgtttgctctgggaagagctcaggaactatgcatgttactggatgactattgggagagg
atggacttgaaagttcctatttatttttcagctggtttaaccattcaagctaacgtgtac
tacaaaatgttgatcggatggactagccaaaagatcaaggacagccatgcagtgcataac
ccctttgacttcaagcatgtttgccactttgagcgttccttcattaacaaccctggtccc
tgtgtactttttgcaacacctggtatgattagtgggggattttctcttgaggcgtttaag
aaatgggcaccatcagagaagaatctgattacacttcccggatattgtgtttctggaacc
attggtcataagttaatgtgtgggaaacctacaaggattgattacaaggacattcatatt
gatgtcagatgtcagattcatcagctagcattcagtcctcatacagactccaaagggatt
atggatctgacagaattcctgtcacccaaacatgtaattctcgttcatggtgaaaagcct
cagatggcttttctgaaggagaggatcgaatctgaattggggatgccttgctattaccca
gggaataatgaatccgtctccattccgacaacccagaaccttaaaatgagtgccacagaa
aggttcattacaagctgtgctgtggagcaaggtaaacgtagcctgcacaagcggaacctg
atttgtggtacaggtttgtcagaagtgattggcagcgatgaggaggcggcggagggcatt
cttctgatggagaaacacaagtctccgaaaattctttgtgaggatgagctccttgaagtg
ctgggcatggagcagcatcttgtccagtttgaaccaatggtctccagaattgtagctgat
gttgaatcggagttgcagcgggctaaggcagcggatttagatagcgatgggaaatga
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