KEGG   Sorghum bicolor (sorghum): 8054699
Entry
8054699           CDS       T01086                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    8054699
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbi03032]
    8054699
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8054699
DNA replication proteins [BR:sbi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    8054699
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     8054699
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 5_3_exonuc MIT DUF3736 TPR_2
Other DBs
NCBI-GeneID: 8054699
NCBI-ProteinID: XP_021311245
LinkDB
Position
3:64290676..64296732
AA seq 840 aa
MGIQGLLPQLKSIMAPISAEELRGQTVAVDTYSWLHKGALSCGDRLCKGIPTTRHIEYCM
HRVNMLRHFGVKPILVFDGGLLPIKSYQETKRARSRKENLERAREHEAAGNSRAAFECYQ
KAVDITPRIASELIEVLKKEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS
RIIFKMDKFGQGVEFQITRLERNRELDFNGFTRQMLLEMCILSGCDYLPSLPGMGVKRAH
ALIQKLKCHEKVIKHLRYGAVSVPPQYEEDFKKAIWAFKFQRVYDPATEDIIHLSSVPHD
LIEDLEFLGPWLPQNIAKGIALGNIDPLTKEPFEIKPECSAPAVHKVCPTREPTAPSNGR
KKLDLPVQKNILTNYFCLASLEAKRKFRAPKVTHKQQILNESLPSPQTQGSDTPDSVEDT
RLPTDHIQASQCSSEHLSSEPPQNDPISVGSQCSSERFSCEYPLDDSDNISPQCSSLDGG
IDTPCKDTSIIDRKVEADYGNENTISTSSCLVGNLSWTSEPFLLPHNVEPSIPVQHHTKS
IVASKNNNITVRSSYFKTVNKRVCTDQEDYDVGTGNLSGDQLRKSGMLKRRKLSGIQDFK
DETLQPIHSDDSPPVVDEETAADQDTDDPDDTNTRTERRFGCNVSHVNTYSGIAEKSMDK
FAALVSSFRYPGPRASGLRAPLKDVKNTLSVRSILKAPEQGTFRRTANKTGLGPPSKSRY
TSDDKKSAASPPDISTFAYRPMKTAASDQGKTTGKATDSTDGPADLGTFAYTSVAPAVCY
PDRSKYAGTATRIADTPPDLSTFAYKPVKGAVRNLGGSRFTGTALKATGGAGGPSRSQFK
NT seq 2523 nt   +upstreamnt  +downstreamnt
atggggatccaggggctgctgccgcagttgaagtcaatcatggcgcccattagcgcggag
gagctgcggggccagacggtggctgttgacacctactcctggctccacaagggcgctcta
tcctgcggcgaccgcctctgcaagggcatccccaccaccaggcatattgaatattgcatg
catcgggtcaacatgttgcggcattttggcgtcaaaccaattcttgtatttgatggaggc
cttctgccaataaagagctatcaagagacgaagcgggcaaggtcaagaaaggaaaacctt
gagcgtgccagggaacatgaggctgctgggaactcacgtgctgcttttgagtgctatcag
aaagctgttgacattacacctagaattgcttctgaactgatcgaggtactgaagaaagaa
aaggttgattatattgttgcaccttatgaagcagatgcacaaatgacattcttatctgtt
aataaacttgttgatgctgtgatcactgaggattcagatttgataccatttggttgttct
agaattattttcaaaatggacaaattcgggcaaggtgttgaatttcagattacacgacta
gagcgaaatagagagcttgactttaatggattcacaagacaaatgttactcgagatgtgt
attttaagtggctgtgactatctcccctcattgccaggaatgggtgtgaaacgagctcat
gcactcatccaaaagctaaagtgtcatgagaaggtgatcaagcacctgaggtatggtgct
gtttctgttccacctcaatatgaagaggacttcaagaaggcaatctgggcatttaagttc
caaagggtgtatgatcctgctacagaagatattattcatttgtcaagtgtgcctcatgac
ctcattgaagatttggaatttttgggcccatggttaccgcagaatattgccaaaggcatt
gctctagggaacattgatccactcacaaaggaaccattcgagatcaaaccagagtgcagt
gcacctgctgttcataaggtttgtccaaccagagagcctactgcaccttcaaatgggagg
aagaagctagatttgcctgtgcagaaaaacattttgaccaactatttctgcttagcatcc
cttgaggcaaaacggaaattcagggcgcctaaagtaacacataagcaacaaatattgaat
gaatctttgcctagccctcaaactcaaggctctgatacccctgattcagtagaagatact
aggttgccaacagatcacatccaagcttctcaatgtagctctgagcatttaagctctgaa
cctcctcaaaatgacccaatcagtgttggctctcagtgtagctctgagcgtttcagctgt
gagtaccccctcgatgattcagacaatatttcacctcaatgcagttcacttgatggtggt
attgatactccttgcaaggatacgagcattatagacagaaaggttgaggctgactatggc
aacgaaaatacaatatctacaagttcttgtttagtgggaaatttgtcctggacatcagag
ccatttttacttccccataacgtggaaccatctataccagttcaacatcatactaaaagc
attgtggcctctaaaaataataacattaccgtaaggagttcatacttcaaaacggtaaat
aagagagtttgcacagatcaagaagactatgatgttggtactggtaatctttctggagat
caactgaggaaatctggcatgttgaagagaagaaagctttctggcatccaagatttcaaa
gatgaaactttacaaccaattcattctgatgatagtccaccagtcgttgatgaagaaact
gctgcagatcaagatacagatgatcctgatgatacaaatacaagaactgaaagaagattt
ggatgcaatgtttcccatgtgaatacatacagtggaattgcagaaaaatcaatggataag
tttgctgcattggtatcatctttcagataccctggtccccgtgccagcggccttcgtgcc
cctttaaaggatgtgaagaacacactttctgtgagatctattctcaaagctccagaacaa
ggcacattcagacgcacagcaaataaaacaggtctagggcccccttcaaaaagcagatat
acaagtgatgataagaaaagtgctgccagcccccctgatattagcacatttgcttatagg
cctatgaaaactgctgcttctgatcaaggcaaaaccacaggtaaagctacagacagtact
gatggccctgctgatttgggaacgtttgcatacacatccgtggcacctgctgtctgctat
cctgatcggagcaaatatgcaggcacagctacgagaattgcagacacccctcctgatctg
agcacatttgcatataaacctgtgaaaggtgctgtcagaaatttgggtgggagcagattc
acagggacagcactgaaagcaactggaggggcaggagggccttctaggagccaattcaaa
tag

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