Sorghum bicolor (sorghum): 8054977
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Entry
8054977 CDS
T01086
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03030
DNA replication
sbi03410
Base excision repair
sbi03420
Nucleotide excision repair
sbi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8054977
03410 Base excision repair
8054977
03420 Nucleotide excision repair
8054977
03430 Mismatch repair
8054977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
8054977
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8054977
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
8054977
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
8054977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_30
AAA_22
RCF1-5-like_lid
AAA_19
RuvB_N
nSTAND3
AAA_assoc_2
PTCB-BRCT
AAA_5
Gp44_lid
BRCT_2
AAA_17
AAA_24
AAA_16
RsgA_GTPase
AAA_18
Sigma54_activ_2
Zeta_toxin
AAA_14
AAA_2
Mg_chelatase
NTPase_1
AAA_33
TsaE
ABC_tran
RNA_helicase
TIP49
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
8054977
NCBI-ProteinID:
XP_021309521
LinkDB
All DBs
Position
2:complement(65829360..65840385)
Genome browser
AA seq
987 aa
AA seq
DB search
MSSDIRKWFMKAHGKNAAPSGAAATKPSGAAAAEKKKPVLSIPEKKSAPPALASCDHDPP
ARRKTSKYFGSKAEKDSDVEMADASAGNSADKSAAKRKLQKCNNELKEDNKPLPAKKISK
DEEDDDDDFVAPPKKKTPVKPPPSKKAKVESNAQVDDAEDEDRMDEDAKTPSKGAGRGRG
RGGRGGAGAAPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGTLD
SLEREEAADLIKRYGGRVTGSISKKTSYLLADEDLGGVKSNKAKDLGVPFLTEDGLFDLI
RKSKPAKAPVDKQQSNNSFEKLQKSQTKSSPAKVEKRAEASAVGKSIASNSNAASASADK
QKPKNVDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGKGKKQAD
SAAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSI
KELISNATLNYGDNRSKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDR
YSQKLKSLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMAL
NHLQYMSLSQSVVKYDDIRERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERIDFGMSD
PDLVPLIIQENYINYRPNTLGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQ
AACFASSIVPAAWMHGNREVLEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHSHILASQQ
ANLDREALRLDYLTLILRELTDPLKKMPKDEAVQKVVEFMDTYSLSQEDFDTIVEVSKFK
GHPSPMDGIQPAVKSALTKAYKQGSSSRVVRAADLINIPGMKKPLKKRVAAILEPLEESV
PEENGLASAEDDEDDSSDTENNDELVPADSTPKLDLQSDKKKGIQVQLDLKSNGNGSSGK
KAPAARSRATGSSGKAAAGGSAGKRKR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacatccggaaatggttcatgaaggcgcatggcaagaacgcggcgccctct
ggagctgccgccacgaagccctcgggagcggcggcggccgagaagaagaagcccgtgctc
agcattcctgagaagaagtcggcgccgcctgcattggcgtcctgtgatcatgatcctcct
gctagaaggaagacaagtaagtactttgggtcaaaagcagaaaaggactcagatgttgaa
atggcagacgcctctgcgggaaacagtgctgacaagagcgcggctaaaagaaaacttcag
aaatgcaacaatgaactcaaggaggacaacaagcctttgccggcaaagaaaatatctaag
gatgaagaagatgacgatgacgactttgtggcacctccgaagaagaaaactccagtgaag
ccaccgccttcaaaaaaggctaaagttgaatctaatgctcaagttgatgatgctgaggat
gaggacaggatggatgaagatgccaagaccccctcaaaaggagctggaagaggaagggga
aggggaggaagaggaggagcaggagctgctcctgggggcagaggtagaggaggaggtggg
agaggttttatgaattttggagagaggaaagatcctcctcacaaaggagaaaaggaggtc
ccagagggtgcccctgattgtttatctggtctgacatttgtcataagtggtacccttgac
agtcttgaacgtgaggaagcagctgatctaattaagcgttatggtggccgtgtgactggc
tctattagtaaaaagacgagctacttactggctgacgaagaccttggtggagttaaatct
aacaaagcaaaagatctgggtgtcccattcttgactgaagatggtttatttgatttgatc
cgaaaatcaaaacctgcaaaagctcctgtagacaaacaacaaagcaacaacagctttgaa
aagcttcagaaatcacagacaaagagctctccagctaaagttgaaaaacgagccgaagca
agtgctgtgggcaaaagtattgcttcaaatagtaatgctgcaagtgcctccgctgacaaa
caaaagcccaagaatgttgaccgtggttctatgcaatggacagaaaaatatcgtccaaaa
gttccaaatgacatagttggcaatcaatcaatggtcaaacaacttcatgattggttgaaa
agttgggatgcactatttcttcattctggccaaaagggtaagggaaagaaacaagctgac
agtgcagccaaaaaggctgtgttgctgagtggacctcctggtattggtaagaccacaact
gctaaagttgttagtcagatgcttggattgcaggccattgaggtaaatgcgagtgatagc
cgtggtaaggcagactccaagattgagaagggtgttggggggagtacatcaaattctatc
aaagagcttatcagcaacgcgactctgaattatggtgacaaccggtcaaaacatcccaaa
gctgtactaatcatggatgaagttgacggtatgtctgctggagatagaggtggtgttgct
gatcttattgctagcatcaagatatccaagatccctattatctgcatttgtaatgaccgt
tatagccagaaattgaagagtcttgttaattactgcctgatgctcaacttcagaaaacca
acgaaacaacagatgggtaaaagattgatggaaattgccaaaaaggaaggtattcaagct
caagagaatgcaatggaagagcttgctgaaagagtgcacggtgatattcgcatggcactc
aatcatttgcagtatatgagcctctcccaatcagtggtcaaatatgatgatataagggag
cggcttaatagcagttcaaaggatgaagatatttctccttttactgctgttgacaaactt
tttggtttcaatggtgggaggttaaggatggatgagagaattgattttggcatgagcgat
cctgatttagttcccttgatcatccaggaaaattatatcaattatcggcctaacaccctc
gggaaggatgaaagtggagttaaaagaatgaatgctctagcccgggctgctgaatctata
gcggacggtgatcttgttaatgtacaaataagaagatatcgacagtggcagttgtcgcaa
gctgcttgttttgcttcatctatagtacctgccgcttggatgcatgggaacagagaagtc
cttgaagcaggtgagcggaactttaataggtttggtggatggttgggtaaatactcgact
actaacaaaaacagaaggctactggaagatgttcacagtcatattcttgcctcccagcaa
gcaaacttggacagggaggcattgaggttggattatcttactcttatcttgagagagctg
actgatccactgaaaaaaatgccaaaggatgaagccgttcaaaaggtggtagagtttatg
gatacatactctttaagccaggaagactttgacacgattgtggaagtatccaaatttaag
ggtcatccaagtcccatggatgggattcaacctgctgttaaaagtgccttgacaaaggca
tacaaacaaggaagtagttctcgtgttgttcgagcagcagatctaatcaatattccaggc
atgaaaaagcctttaaagaaacgagtggcggcaatcttggagccactagaagagagcgtg
cctgaagaaaatggactcgcatcagctgaagatgacgaagatgattcttctgatactgaa
aataatgatgaacttgtgcctgccgattctacgccgaagctggacctgcaaagtgacaag
aagaaaggaattcaagtccagcttgacctgaagagcaatgggaatggctctagtgggaag
aaggcgcctgccgccagatcaagagcgactgggtccagtgggaaggccgctgcgggaggc
tcggctgggaagaggaagaggtaa
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