Sorghum bicolor (sorghum): 8055085
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Entry
8055085 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8055085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8055085
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8055085
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8055085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
Zn_ribbon_6
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
8055085
NCBI-ProteinID:
XP_002451467
UniProt:
C5XTS0
A0A921R1D4
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All DBs
Position
4:2156826..2160058
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AA seq
311 aa
AA seq
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MAPGSSIVTVVPESDCGDDDGLSEALGGIRLDVDSASKPWSTSLANVALSSLSGLNDLLE
CPVCTNSMRPPILQCPNGHTICSSCKHRVENHCPTCRQELGNIRCLALEKVAEQLQLPCK
YQSMGCTEIHPYKNKLKHEELCRFRPYNCPYAGSECLITGDVPFLVSHLINDHKVDLHEG
CTFNHRYVKPNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMAPVYMAFLRFMGEESEA
QGFGYSLEVGGGGRKLTWQGTPRSIRDSHRKVRDSFDGLIIHRNMALFFSGGGRQELKLR
VTGRIWKEQGQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaggaagcagcattgtgactgtagtccccgagtcggactgtggtgatgacgat
gggctttctgaggcacttgggggtatccggcttgacgtagactctgcaagtaaaccatgg
tctacatcactagccaatgttgcattatcatcactgtctggcttgaatgatttgctcgaa
tgtccagtgtgtaccaactcaatgcgcccacctatactccagtgcccaaatggccacaca
atctgctctagttgcaagcacagggtggagaaccattgcccaacttgtcgccaggaactg
ggaaacatcaggtgcttagctcttgagaaggtggcagaacaactccagcttccatgcaaa
taccagagtatgggatgcactgagattcacccatacaagaacaaactcaagcacgaggag
ctctgcaggttcaggccgtacaactgtccgtacgcaggttcagagtgtctgatcacaggt
gatgttccgtttctggtgtctcatctcatcaatgaccataaggtggacttgcatgagggc
tgcacgtttaaccaccgatatgtgaagcccaacccttacgaagtggaaaatgctacatgg
atgctcactgttttcaagtgttttgggcagcacttctgcctgcactttgaggcgttcctg
ctggggatggcgccggtgtacatggcgtttctgcggttcatgggtgaggagagcgaggcg
caggggttcgggtacagcctagaggtgggtgggggcgggcggaagctgacatggcagggc
acgccgcggagcatcagggacagccaccggaaggtgcgggacagcttcgacgggctcatc
atccacaggaacatggcactcttcttctcaggcggcggtaggcaggagctcaagctgcgg
gtcactggccgcatctggaaggagcaagggcaatga
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