Sorghum bicolor (sorghum): 8055143
Help
Entry
8055143 CDS
T01086
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04016
MAPK signaling pathway - plant
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
8055143
04075 Plant hormone signal transduction
8055143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8055143
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
8055143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
GAF_2
Motif
Other DBs
NCBI-GeneID:
8055143
NCBI-ProteinID:
XP_002467448
LinkDB
All DBs
Position
1:complement(56318174..56321069)
Genome browser
AA seq
709 aa
AA seq
DB search
MNLWTDDNASMMEAFMASADLPTFPWGATAGGGNSSAAAATPPPPPQMPAAAMAPGFNQD
TLQQRLQAMIEGSSETWTYAIFWQSSLDAATGASLLGWGDGYYKGCDDDKRKQRPLTPAA
QAEQEHRKRVLRELNSLISGAAAAPDEAVEEEVTDTEWFFLVSMTQSFLNGSGLPGQALF
AGQPTWIASGLSSAPCERARQAYNFGLRTMVCFPVGTGVLELGSTDVVFQTAESMAKIRS
LFGGGAGGGSWPPVQPQAPSHQQPAAGPDQAETDLWLADAPVMDIKDSMSHPSAEISVSK
PPPPPPPPQIHFENASTSTLTENPSPSVHAAPPQPAPAAAPQRQHQHQNQAHQGPFRREL
NFSDFASTNPSSLAATPPFFKPESGEILSFGADSNARRNPSPAPPAATASLTTAPGSLFS
QHTATMTQAAAANDAKNNNKRSMEATSRASNTNHHPAATANEGMLSFSSAPTTRPSTGTG
APAKSESDHSDLDASVREVESSRVVAPPPEAEKRPRKRGRKPANGREEPLNHVEAERQRR
EKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTSLESDKDTLQAQIEALKKE
RDARPPAHAAGLGGHDGGPRCHAVEIDAKILGLEAMIRVQCHKRNHPSARLMTALRELDL
DVYHASVSVVKDLMIQQVAVKMASRIYSQDQLNAALYSRLAEPGSAMGR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtggacggacgacaacgcctccatgatggaggcctttatggcctccgccgac
ctccccaccttcccctggggggcgacggccgggggcggcaactcgtcggccgccgctgcg
acgccgccgccgccgccgcagatgccggcggcggcgatggcgccggggttcaaccaggac
acgctgcagcagcggctgcaggccatgatagaagggtccagcgagacatggacctatgcc
atcttttggcagtcctccctggacgccgccaccggcgcctcgctgctcggctggggggac
ggctactacaagggctgcgacgacgacaagcgcaagcagaggccgctcacgcccgccgcc
caggccgagcaggagcaccgcaagcgcgtgctccgcgagctcaattccctcatctccggc
gccgccgcggcgcccgacgaggccgtcgaggaggaggtcaccgacaccgagtggttcttc
ctcgtctccatgacgcagtcgttcctcaacgggtccgggctccccgggcaggcgctcttc
gcggggcagcccacctggatcgcctctggcctctcctccgcgccgtgcgagcgcgcgcgc
caggcctacaacttcggcctccgcaccatggtctgcttccccgtcggcaccggggtgctc
gagctcggctccaccgacgtcgtgttccagaccgccgagagcatggccaagatccgctcg
ctcttcgggggcggagcagggggtggctcgtggccgcccgtgcagcctcaggcgccgtcg
catcagcagcccgcggccggacccgaccaggcggagacggacctatggctcgccgacgcg
ccggtcatggacatcaaagattccatgtcgcacccgtcggctgagatctccgtctccaag
ccgccgccgccgccgccgccgccacagatccattttgagaacgcgagcacgagcacgctc
acggagaaccccagcccatccgtgcacgcggcgccaccccagccggcgccggccgctgca
ccgcagcggcagcaccagcaccagaatcaggctcaccagggccccttccgccgggagctc
aatttctccgactttgcgtccaccaacccttcttccttggcggcgaccccgcccttcttc
aagcccgagtccggcgagatcctcagcttcggcgccgacagcaacgcccggaggaacccg
tcgccggctcctcccgccgccaccgccagcctcaccaccgctcccgggagcctcttctcg
cagcacacggcgaccatgacacaggccgccgcggcgaacgacgccaagaacaacaataag
cgttcaatggaggccacctcccgggcgagcaacaccaaccaccacccggcggcgacggcg
aacgagggcatgctgtccttctcgtcggcacccactacgcggccgtcgacgggcacgggc
gcgccggccaagtccgagtccgaccactcggacctggatgcgtccgtgcgcgaggtggag
agcagccgcgtcgtggcgccgccaccggaggcggagaagcggccgcgaaagcgcgggcgg
aagccggcgaacgggcgcgaggagccgctgaaccacgtggaggcggagcggcagcggcga
gagaagctgaaccagcgcttctacgcgctgcgcgccgtggtgcccaacgtgtccaagatg
gacaaggcgtcgttgctcggcgacgccatctcctacatcaacgagctccgcggcaagctg
acgtcgctggagtccgataaggacacgctgcaggcccagatcgaggcgctcaagaaggag
cgcgacgcgcggccacccgcgcacgccgctgggctcggcggacacgacggcgggccgcgc
tgccacgcggtggagatcgacgccaagatcctaggtctggaggccatgatccgcgtgcag
tgccacaagcgcaaccacccgtcggcgcggctgatgacggcgctccgcgagctggacctg
gacgtctaccacgccagcgtctccgtcgtcaaggacctcatgatccagcaggtcgccgtc
aagatggccagccgcatatactcgcaggaccagctcaacgccgcgctctacagccgcctc
gcagagcctgggtctgccatgggcaggtaa
DBGET
integrated database retrieval system