Sorghum bicolor (sorghum): 8055351
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Entry
8055351 CDS
T01086
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8055351
04121 Ubiquitin system [BR:
sbi04121
]
8055351
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
8055351
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
8055351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
Motif
Other DBs
NCBI-GeneID:
8055351
NCBI-ProteinID:
XP_002454823
LinkDB
All DBs
Position
4:complement(68201521..68205083)
Genome browser
AA seq
1089 aa
AA seq
DB search
MPPSSDRRRGGGPVATASRMWRPRYAAPAPDGAAPILPIPTPAPEARPRHRRPNHGNNGD
NRRPAPSQEQNGDAGHHRHGAPTERPAAAARETRADGAVPQLVQEIQDKLARGAVECMIC
YDMVRRSAPVWSCGSCFSIFHLPCIRKWVRSPASAADASPAAADPASASPSWRCPGCQFV
YATPARDLAYTCFCGRRRDPPNDHFLTPHSCGEPCSRPLERAEPPGAKGEDADATRCPHV
CVLQCHPGPCPPCKAFAPDRPCPCGKQIIVRRCADRSTPVTCGRPCQQMLTCRRHRCEKV
CHTGSCGDCDVLISARCFCGKKNEALLCGDMVVKGKLSEEDGLFSCSEVCGRTLACGNHA
CKDMCHPGSCGECELMPGKVTTCHCGKTRLQETRASCLDAIPTCDKICDKKLTCGVHRCK
VNCHDGECPPCLVRVEQKCRCGSSAQMVECYKVSMEEFRCNKPCGCKKNCGRHRCSELCC
PLSRKFAQLEGGDWDPHLCQISCGKKLRCGQHSCQLLCHSGHCPPCLETIFTDLTCACGR
TSLPPPLPCGTPTPSCSHQCSVPQPCGHPASHSCHFGDCPPCVVPVMRECIGGHVMLRNI
PCGSKDIRCNQPCGKNRQCGVHACNRPCHPPPCDQPPANGDASSSSGGKASCGQVCGAAR
RECKHTCTAPCHPSSQCPDLRCEFAVTITCSCGRINATVPCGAGGASMGDNLFEVSIIQK
LPMPLQPVESNGRKVPLGQRKLSCDEECAKMEKKRVLAEAFDITPPNLDALHFGENSSSS
DLVADLFRREPKWVLAIEERCKFLVLGKVRGSSSSNLKLHVFCHMLKDKRDAISLIANRW
KLSVQVAGWEPKHFVIIHVTPKSKPPARILGSKPGAPVTAAHPYFDPLVDMDPRMVVAML
DLPRDADVTALVLRFGGECELIWLNDKNAIAVFNDPTRAATALRRLDYGSGYQGAVMFMP
SSAQASSSGNVWIGGQKDGGLAARSNPWKKPASAEPDMSSGDRTGVAGHAPAPGWRGANT
TSRVMETPNRWNVLESDAAASSVPGNEWRRAVPCTDASYSAIPNAGNAGPSVTKLQPDVD
VDDWEEACE
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccgccctcctcggatcgccgccgcgggggtggacccgtggccaccgcctcccgcatg
tggcgcccccgctacgccgctcccgcccccgacggcgccgccccgatcctgcccatccct
acgcccgccccggaggcccgcccgcgccaccgccgccccaatcacggcaacaacggggac
aatcgccgccccgccccgtctcaggagcagaacggcgacgcaggacaccatcgccacggc
gcgccaacggagaggcccgccgccgctgcccgcgagactcgggccgacggggcggtgccg
cagctggtgcaggagatccaggacaagctcgcccgcggcgcggtggagtgcatgatctgc
tacgacatggtgcggcggtcggcgcccgtctggtcctgcggcagctgcttctccatattc
cacctcccctgcatccgcaagtgggtgcgctccccggcctccgccgccgacgcatccccg
gcagcagcagaccccgcctccgcttcaccctcctggcgctgcccggggtgccagttcgtc
tacgccacccccgcccgcgacctcgcctacacctgcttctgcggccgccggagagatccc
cccaacgaccacttcctcacgccccactcctgcggcgagccctgctccaggcctctcgag
agggcggaaccgccgggcgctaagggggaggacgctgacgccaccaggtgcccgcacgtc
tgcgtccttcagtgccacccgggaccgtgcccgccctgcaaagcattcgctccggatcgg
ccctgcccctgcgggaagcagatcatcgtgcggcggtgtgcggaccggagcactcctgtc
acctgcggccgcccttgccaacagatgctgacctgcagaaggcatcgctgcgagaaggtt
tgccacactggttcttgcggggattgcgatgttctcatctctgcgcggtgcttctgcggc
aagaagaacgaggcattgctatgtggagacatggtggtaaaggggaagctgtccgaggag
gacggcctgttttcttgcagtgaggtgtgtggccgcacacttgcctgtggcaatcatgcc
tgcaaggatatgtgccacccagggtcttgtggggagtgcgagctcatgccagggaaggtc
actacatgccattgcggcaagacaaggctgcaggagacgagggcaagctgcttggacgca
atccccacctgcgacaagatatgcgataagaaactgacatgtggggtgcataggtgcaag
gtcaactgccatgatggagaatgcccgccttgcttagtgcgcgttgagcagaagtgccgt
tgtggctcgtcagctcagatggtggagtgctataaggtctcaatggaagagttccgctgc
aacaagccttgtggctgcaagaagaactgtgggaggcatcgttgcagtgagctctgttgt
ccactgtctagaaaatttgcacagcttgaaggtggcgactgggatccccatctctgccag
atatcatgtggcaagaagctccgttgtgggcagcattcgtgccagctactctgccacagt
ggtcattgcccgccgtgcttggagactatattcactgatctcacttgtgcctgtggcaga
acttctctcccaccacctttgccttgtggaacaccaacaccatcttgttcgcatcagtgt
tcagttccccagccttgtggacatccagcctcgcattcatgccattttggggactgtccg
ccttgtgtggtgccggtaatgagagaatgcatcgggggacatgtgatgctgaggaacatc
ccttgtggatcgaaggatatcaggtgcaaccaaccatgtgggaagaatcgccaatgtgga
gtccatgcttgcaacaggccttgtcatcctcccccttgtgatcagccacctgcaaatgga
gatgctagctcaagctctggtggcaaagcttcttgtggacaggtatgtggtgccgcaagg
agagaatgcaagcatacatgcactgccccatgccacccatcgtcccaatgcccagatttg
agatgtgaattcgctgtgactatcacctgttcttgtggacgaatcaatgcaactgttccc
tgcggtgctggtggagcctccatgggtgataatttgtttgaagtctccatcatccagaag
ctgccaatgcctctccagccagtggaatcaaatgggagaaaggtgcctcttgggcagagg
aagctttcttgtgatgaggagtgtgcaaagatggagaagaagagggttcttgctgaagca
tttgacatcaccccacccaatttggatgcattgcattttggtgagaattcaagttcatcg
gatttggttgctgacttgttccggcgtgagccgaagtgggtgctggctatagaagagagg
tgcaagttccttgtacttgggaaggtgagaggcagttcttcaagcaatctgaaattgcat
gtattttgtcacatgttgaaggacaagagagatgctatcagtctaattgcaaaccgatgg
aagctttctgttcaggtggctggttgggagcctaagcattttgttatcatccatgtcaca
cccaaatcgaaaccgcctgctcgcatcctggggtccaaaccaggtgcacctgttacagct
gcccatccttactttgatccactggttgacatggatccgaggatggttgttgcgatgctg
gacctgccacgggatgctgatgtcactgctctagtcctaaggtttggtggggaatgtgaa
ttgatctggctgaatgacaagaatgccatagctgtcttcaatgatccaactagagcagca
acagcactgaggcggctggattatgggtctggttaccagggtgctgtgatgtttatgcca
agcagtgcccaggcatcttcttcaggcaatgtttggattggagggcagaaggatggaggg
ctcgctgctaggagcaatccttggaagaagcctgcttctgctgaacctgacatgtcctct
ggagacaggactggtgttgctgggcatgccccagcaccaggatggagaggcgccaacact
acctctcgagtcatggagactccaaaccgatggaatgttctggaatcagatgctgctgca
agctctgttccaggtaacgagtggaggagggctgttccatgcaccgatgcttcatacagc
gcaataccaaacgctgggaatgctgggccatcagtgaccaagctgcagccggatgtggac
gtggacgactgggaagaagcttgtgaatga
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integrated database retrieval system
