Sorghum bicolor (sorghum): 8055363
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Entry
8055363 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8055363
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
sbi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8055363
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
8055363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8055363
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
8055363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
8055363
NCBI-ProteinID:
XP_021320781
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All DBs
Position
7:65051762..65056296
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AA seq
602 aa
AA seq
DB search
MDPDGDPAFHRNEAISAVQDVDQYYGDDDDFDDLYNDVNVGDGFLHASHQAPPPPTQQAP
PPQQHQHQQQQLPPPPQQPQPQQQLHPPAHTLPPPPPQVPPPQQQVRIPGVAVPGPGIPP
GQTSLPPPPQPPAAPAPPPPQHHQIHQGDGINRPGGNFAGGPIVVGNGGPAGGGDGPGGT
TLFVGELHWWTTDADLESELSKYGPVKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKEG
MNGHAFNGRPCVVAFATPNSVRRMGEAQVKNQQAMAAQTSNMQPKGGRGGGGAAGPQVGG
NYGGGRGGAIGPGAGGGAGGGGGNWGRGGGGMGNRGPVGNMRNRMGPAGGGRGIMGNGGM
VAPPPPMMPPGGMLGQGFDPAGYGAMGRMGGGFGGFPGGPGAMPFPGLMQPFPPVVAPHV
NPAFFGRGGMGAGGMWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREWSG
APERRREREKDAPPAQEWPERRHRDERDMDRERNRDYDRDRERDRDRERDRDRDRERDRD
RERERERERERHRDDRDRYGDYHRHRDRDSERNEDWDRGRSSGIRSRSREADHSKRRRMT
PQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgacggcgacccggcgttccaccgcaacgaggccatctccgcggtccaggac
gtcgaccagtactacggcgacgacgacgacttcgacgacctctacaacgacgtcaacgtc
ggggacggcttcctccacgcctcccaccaggcgccgccgcctccgactcagcaagcacct
ccgccacagcagcaccagcaccagcagcaacagctccctccgccgccccagcagccgcag
ccgcagcagcagctgcatccgccggcccacaccctcccgccaccgccgccgcaggtccca
ccgccacagcagcaggtacgcatcccgggggtggccgtccctggtcctggcattcctccc
ggccagaccagcctccctccgccgcctcagccgccggccgcgcccgcgccgccgccgcct
cagcaccaccagattcatcaaggagatgggatcaaccgccctggaggaaacttcgccggc
ggccccatcgtggtcgggaacggtggccctgctggcgggggtgacggccctggcggcacc
acgctgttcgtgggggaactccactggtggacgacggatgcggatctggaatctgagctc
agcaagtatggtccggtcaaggaggtgaggttcttcgacgagaaggctagtggcaagtcc
aagggctactgccaggtcgatttctatgaccctggtgcagctgctgcctgcaaggagggc
atgaacgggcatgcgtttaatggccgtccatgtgttgtggcattcgccacaccgaactcc
gttcgccgcatgggcgaggcgcaggtgaagaaccagcaagctatggctgcacagacatcg
aatatgcagccgaagggcggtagagggggtggtggtgccgcagggccccaggtgggtggt
aattatggtggtggccgtggaggagccattggacctggtgccggtggtggagcaggtgga
ggtggtggaaattggggaagaggtggaggaggcatggggaatagaggccctgttggtaat
atgaggaataggatgggcccagctggtggcggccgtgggataatggggaatggggggatg
gttgcaccaccaccaccaatgatgccgcccggtggaatgctggggcagggttttgatcct
gctggttacggtgctatgggaaggatgggtggaggatttggcggttttcctggtggacca
ggggctatgccattccctgggctgatgcaaccattcccgccggttgttgctccacatgtt
aacccagctttctttggtcggggcggaatgggtgctggtggaatgtggcctgatcccaac
atgggagcctggggtggggaggaacaatcaagttacggggatgacgcagcttctgatcag
cagtatggagaaggagggagccatgggaaagagaggccaccagagagggagtggtctggt
gcaccagagaggaggcgtgaaagggagaaggatgcgccccctgcacaggagtggccagag
aggaggcaccgggatgagcgtgacatggaccgagagaggaatcgtgactatgacagagac
agggaaagagaccgtgacagggaaagagaccgagaccgagacagggagagggacagagat
agggagagagagagggagagggagagagagaggcatcgggatgacagagatcgctatggc
gattatcacaggcacagggatcgtgattcagaacgtaatgaggactgggacagggggagg
tcttctgggatacgcagcaggtcaagggaggctgaccactctaagcgcaggcggatgaca
cctcagtag
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