Sorghum bicolor (sorghum): 8055758
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Entry
8055758 CDS
T01086
Name
(RefSeq) ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbi03036
]
8055758
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8055758
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
8055758
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA
AAA_22
DUF3175
Motif
Other DBs
NCBI-GeneID:
8055758
NCBI-ProteinID:
XP_002439462
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All DBs
Position
9:11647940..11655109
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AA seq
868 aa
AA seq
DB search
MPMPPPPPPPREDFPAFPFAPYPIQSEFMSFLYAALSSGPGALALLESPTGTGKTLSIIC
SALQWLLDHRDAAAAAPALPSGAAGPGGDDDEPDWLRDFTPLPPVKESTKKKAKPPALRK
TVVSRKSDGFGEEDGGDDEREFLLEEYESDREDVARQGVGKRAHCGGCSSSEGEELDDEE
DEEEVMPKVYFTSRTHSQLSQFVGELKRTEFAGRIRTVCLGSRKNLCINKDVLKMGSANR
INERCLELQKNKKSTKVKLEDDKRKVRPAKRSCGCPMLRSRSLQKEFRSEVSNQGALDIE
DLARIGKKIGTCPYYGSRDMIRSADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEAHNL
ADSLTNMYNSKITSSQLKTVLSHLDEYLNRFHNVLGAANRRYIQTLTVLTRSFLRVLINK
QDGASNMSSMTINQFLFSLDIDNINIVKLCQFVKESNIIHKVSGYANKLTSIQNQFDIQL
HDEGSSIACLQALVDFIRSLLNSNNDGRIIVAKQKLGGQPDEAYLKFVMLCAEKIFSEVT
QDAYAVILAGGTLQPIEETRLRLCPSLPPTDIKFFTCNHIVPPESILPIAVTRGPSGMTF
DFSYNSRSSPSMIEELGRFICNIITVVPEGVVMFFSSYDYERRVYDAWMTAGTISKISKK
KHVFREPRNSADVEGVLNKYKETIESCSKISQDTGVNGALLLAVVGGKISEGINFSNGMG
RCVIMVGLPYPSPSDVELIETIKHIESISSSFLVGDDKASSRKYDDECELQPGYDIFRKC
TRGGREYYENLCMKAVNQSIGRAIRHINDYAAMLLVDSRYAQTSSTKNFSCPTDKLPQWI
KARLSCAQNYGEVHRSLHQFFKFNKQKC
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgccgccgccgccgccgccgccgcgggaagacttcccggcgttcccgtttgcg
ccgtacccgatccagtcggaattcatgtcgttcctctacgccgccctctcctctggcccc
ggcgccctggccctcctcgagagccctaccggtactggcaagacgctcagcatcatctgc
agtgcgctgcagtggctcctcgaccaccgcgacgccgccgccgcggcaccggccctcccc
agcggcgccgctggccccgggggtgacgacgacgagcccgactggttgcgggatttcacg
ccgctgccgccggttaaagagagcacgaagaagaaggcgaagcctcccgcgttgaggaaa
acggtggtttcacggaaatcagacggatttggggaagaagacggcggcgacgacgagcgg
gagttcctactcgaggagtatgagagcgatagagaagacgtcgcgagacagggtgtaggg
aaacgagcacattgcggtggttgcagtagtagcgagggcgaggagctggatgatgaggag
gacgaggaggaggtgatgcccaaggtctacttcacaagccgcacgcactcgcagctctct
cagttcgttggggagctcaagaggacggagttcgcggggcggatcaggacggtgtgcttg
gggtccaggaagaacttatgcatcaacaaggatgttctgaagatgggcagtgcaaaccgg
attaatgagaggtgcttggaactgcagaagaacaagaaaagcaccaaagttaagcttgag
gatgataaacgaaaggtgcgcccagcaaagcgctcttgtggctgcccgatgttaagaagt
agaagtctacagaaagagttcaggagcgaagtgtcaaaccaaggtgcattagacatcgag
gatttggcacgaatagggaagaagattggaacttgtccctactatggttcgcgtgacatg
atccgctcagctgaccttgtagtccttccttatcaatctttgttactcaagtctgctaga
gaatcacttggccttaatctgaagaacagtgttgtcatcatagatgaggctcataactta
gctgattccttgactaacatgtacaactcaaagatcacgtcttctcagttgaagacagtc
ctttcccacctggatgaataccttaacagatttcacaatgttttgggagctgcgaatcga
cgatacatccagaccttgacagttttaacaaggtctttcctacgtgttttgatcaataag
caagatggtgccagcaatatgtcttctatgaccataaaccaattcttgttttcccttgac
attgataatataaacatagtaaaactttgtcagtttgtgaaagaaagcaatataatccac
aaggttagtggatatgcaaacaagttaactagcatccaaaatcagtttgatatccagctc
catgatgaaggaagcagtatagcatgccttcaggcattggttgactttatacgctccctt
ctgaacagcaataacgatggaagaatcatagttgcaaagcaaaagctaggtggacaacct
gatgaagcatatcttaaatttgtgatgctttgtgcagaaaaaatattttccgaggttaca
caggatgcttatgctgttatcctggctggtggaaccctccagcctattgaagaaactagg
ctacgcttgtgtccaagcttaccaccaactgatataaaattcttcacttgcaaccatatt
gttcctcctgagagtattcttccaatagcagttacacgtggaccctcaggcatgacattt
gatttcagctacaattcaaggagctctccttctatgattgaagagcttgggcgtttcatt
tgtaatattataacagttgtgcctgagggagttgttatgtttttttcttcatatgattat
gaaaggcgtgtatatgatgcatggatgaccgcaggcacaatttccaagatttctaaaaag
aagcatgttttcagagagccaaggaacagtgctgatgttgagggtgtcctcaacaaatac
aaggagacaattgaatcctgtagtaaaatttcccaagacacaggtgtcaatggggcactt
ctattagccgttgttggtgggaagatttctgaaggcataaacttcagcaatgggatgggt
cgttgtgtaataatggttggcttgccttatccaagtccatctgatgttgagctgatagag
accataaagcatatcgaaagtatttctagctcatttttggttggagatgataaggcctca
agcagaaaatatgatgatgaatgtgaactccagcctggttatgatatatttcgtaagtgc
actagaggtggaagagagtattatgagaacttatgcatgaaagctgtgaatcaatctatt
ggcagagcaatcaggcacataaatgattatgctgcaatgctattggttgactcacgttat
gcacagacttcatcaaccaagaatttttcctgccctactgataagcttcctcaatggata
aaagcacgactctcttgtgctcaaaactatggagaagttcatagatcattacatcagttc
ttcaaattcaataaacaaaaatgttga
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