Sorghum bicolor (sorghum): 8055826
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Entry
8055826 CDS
T01086
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2
KO
K03265
peptide chain release factor subunit 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8055826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8055826
03012 Translation factors [BR:
sbi03012
]
8055826
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
8055826
Translation factors [BR:
sbi03012
]
Eukaryotic type
Release factors
8055826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
VanY
Motif
Other DBs
NCBI-GeneID:
8055826
NCBI-ProteinID:
XP_002439705
UniProt:
C5YX98
LinkDB
All DBs
Position
9:46372263..46375898
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AA seq
438 aa
AA seq
DB search
MGEVHEADKNIEIWRVKKLIKALDAARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYSRVPPNGLVLYTGTIVTDDGKEKKVTFDFEPFRPIN
ASLYLCDNKFHTEALNELLASDDKFGFIIMDGNGTLYGTLSGNSREVLYKFSVDLPKKHG
RGGQSAVRFARLRMERRHNYLRKVAELATQYFINPATNQPNIVGLILAGSADFKNELGKS
EMFDPRLQAKVVKMIDVSYGGDSGFNQAIEMSAEVLSDVKFVQEKKLIGKYFEEISQDTG
KYVLGVEDTMTALEMGAVEILIVWENLDVRRYELKNSVTGETVVKYLNPTQEADQSNFTD
AATSGDLEVIDNTQLLEWFAENYHQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYPADV
SAYQDGDLSDGEYDEDFE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggtacacgaagctgacaagaatattgagatctggagggtcaagaagttaatc
aaggcgcttgatgctgcaaggggcaatggcactagcatgatttctctcatcatgccacct
cgtgatcagatttcacgcgtcactaagatgctgggtgatgagtatggaactgcctcaaac
atcaagagcagagtcaacagacagtctgtgttggctgccataacctcggctcaacagagg
ttgaagctttacagtcgagttccccccaatggcttggtgctctatactggtaccattgtc
accgatgatggcaaagagaagaaggttacctttgactttgagccatttagacccattaat
gcttccctgtatctctgtgacaacaagtttcacactgaggcactgaatgagcttctggca
tctgatgacaaatttggtttcataatcatggatggcaatggaacactgtatggcacgctg
agcggaaacagcagggaggttctgtacaagttcagtgttgatctcccaaagaagcatggg
cgaggagggcaatctgcagtccgctttgcccgcttgcgcatggagaggcgacacaattac
ctgcgcaaggttgctgagcttgcgacacaatacttcatcaatcctgccaccaaccagcca
aacatcgttgggcttattcttgccggttctgctgacttcaagaatgaacttggtaaatct
gagatgtttgatccgcgtcttcaggccaaagtagtcaagatgattgacgtgtcttatggt
ggggacagcggcttcaaccaagccatcgagatgtccgctgaggttctttctgatgttaag
tttgtccaagaaaagaagcttatcgggaagtactttgaggagataagccaagacacaggg
aagtatgtccttggcgtcgaggacaccatgacagccctggaaatgggcgctgtagaaatc
ctgattgtgtgggaaaaccttgatgtcaggcgttatgagctcaagaacagtgtcacagga
gaaacagttgtgaagtacctgaaccccactcaggaggctgatcagagcaactttactgac
gcggcgacatccggagatctggaggtcattgacaacacacagctgctggagtggtttgct
gagaactaccaccagtttggctgctcgcttgagtttgtcaccaacaagtcccaggaaggt
tctcagttctgccggggatttggcgggatcggtgggatcctccgctacccagccgatgtc
agtgcctaccaggatggtgacttgtctgatggggagtatgatgaagacttcgaatag
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