Sorghum bicolor (sorghum): 8055974
Help
Entry
8055974 CDS
T01086
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8055974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8055974
Spliceosome [BR:
sbi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
8055974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
8055974
NCBI-ProteinID:
XP_002446918
UniProt:
C5YDJ9
A0A921QR96
LinkDB
All DBs
Position
6:52905010..52911560
Genome browser
AA seq
484 aa
AA seq
DB search
MANLADSFLADLDELSDNEGYPEEDNAEEVGREEEDDDMADLESLNYDDLDSVSKLQKTQ
RYHDIMQKVEVALQKGTDFSSQGFILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLS
EDNLEKTTEACDRALTLDAAKKKVLDFVESRMGYLAPNLSAIVGSAVASKLMGTAGGLGA
LAKMPACNVQLLGAKRKNLAGFSTASSQFRVGYLEQTEVFQSTPPALRTRACRLIAAKST
LAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRLR
KMKERYAQTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAQGNLLGGGTQSTYFSETGTFSKI
RRTQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttgctgattcttttctagcagatctggatgaactgtcagacaatgaaggc
tatcctgaagaagacaatgctgaggaagtgggaagagaagaagaagacgacgatatggct
gaccttgagtctctaaattatgatgatcttgatagtgtctcaaagttgcaaaagacacaa
cgctatcatgatataatgcaaaaagttgaagttgcacttcagaaaggcactgacttctct
agtcaaggtttcatcctggaggaggatccagagtaccagcttattgttgactgcaatgct
ttatcagtagatattgagaatgaaataatcataatccataatttcatacgggacaaatat
aggttgaagtttcctgaattggagtcccttgttcatcacccaatcgattatgcccgtgtt
gtcaagaagattggaaatgagatggatttaacacttgtagatctggaagggcttttacct
tctgcaattataatggttgtttcagtgacagcatcaacaacaagtgggaagcctctttct
gaagacaatttggaaaaaaccactgaagcatgtgacagagcccttacccttgatgcggca
aagaagaaagtgcttgattttgtagagagcagaatggggtaccttgcaccaaacctttct
gcaattgttggcagtgctgttgcctccaaactgatgggtactgcaggtggtctgggagca
cttgcaaaaatgcctgcttgtaatgttcagttacttggtgcaaagaggaaaaatcttgct
ggattttctactgcctcttctcagtttcgtgttggctatctggaacaaactgaagtattt
cagagcacccctccagctttaaggactcgtgcctgcagacttattgctgcaaaatcaact
ctggcggcaaggattgattcaattagaggtgatccaactggaaaagctggacgaaacttg
ttagaagaaattcgtaagaagatcgagaagtggcaagaaccgcctcctgccaagctccca
aagccacttccagttccggactccgagcctaaaaagaagagagggggccgtcgtcttcga
aaaatgaaagaaagatatgcgcagactgatatgatgaagcttgcaaaccgaatgcagttt
gggattccagaggaaagctcactaggtgatggcttgggggaaggttatggcatgcttgga
caggcagggagtggcaagctacgtgtctcagctggacaaagcaaacttgctgctaaagtg
gccaaaaaattcaaggagaagagctatggtagcagtggtgcaacttcaggattgacatcc
agtttggcatttacaccagttcagggaatagagctgtcaaatccacaggcccaaggaaac
cttcttggaggcggaactcaaagcacttacttttctgagaccggcacgttttcaaagatc
aggaggacgcaatag
DBGET
integrated database retrieval system
