Sorghum bicolor (sorghum): 8056136
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Entry
8056136 CDS
T01086
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8056136
Membrane trafficking [BR:
sbi04131
]
Protein recycling
Others
EARP complex
8056136
Endosome - Golgi transport
Tethering complex
GARP complex
8056136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG7
Vps54_N
COG4_N
RINT1_TIP1
COP9_hel_rpt
MPH2
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
8056136
NCBI-ProteinID:
XP_021312770
LinkDB
All DBs
Position
3:complement(70501775..70510440)
Genome browser
AA seq
838 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIQSEIRRVDASILAAVRQQSNSGTKAKEELA
AATNAVQELMHKIHEIKTKAEQSETMVQEICRDIKKLDCAKRHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKKILKSHVFSD
FSSLGTGKETEDPMLLQQLSDACLVVDALEPSVREELVKNFCSKELTSYRQIFEGAELAK
LDKTERRYAWIKRRLRSNEDTWKIFPLSWHVDYLLCIQFCKITRAQLVDILNNLKEKPDV
ATLLLAFQRTLEFEEELAEKFSGGTTNARNKETASDDEDEGGEHNKIVSDIRKKYEKKLA
GPSDEAVQDKDKQKDLSVPGAGFNFHGIISSCFEPYMTVYIELEEKSLVDQLEKLVQEER
WETEEGSQTNILSSSMQVFLVIRKSLKRCSALTKNQTLFNLFQVFQRILKAYAAKLYARL
PKGGTGIVAAATGTDGQIRTSDRDERMICYIVNTAEYCHQTSGELAENVAKMINPQFADK
VDMSEVQDEFSAVITKALMTLVHGLETKFDAEMVAMTRVPWATLESVGDQSEYVNGISSI
LSSSIPVLGTLLSPTYFQYFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTI
LLDIPALGKQSTGAASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQR
ILDLKGLKKADQQTILEDFNKHAPAPAPAIKHPVVAPTVAPPVATASVQIVPSVATPAVS
MTPSMASLKGALANQEDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagtgctctcgaatacatcaaccagatgttccccacagaggcgtcgttg
tcgggcgtggagccgctgatgcaaaagatacagagtgagattcgccgagtggacgccagc
atcctcgccgctgttcgacagcagagcaactcgggaaccaaggccaaggaagaacttgct
gctgcaacaaatgctgttcaggaactaatgcacaagatacatgaaataaaaacaaaggcc
gaacaaagtgaaactatggttcaagaaatctgtcgcgacatcaaaaagttggattgtgct
aagaggcacataacaactacaataaccgctcttcaccgtcttactatgcttgtttcggct
gttgagcaacttcaggttatggcgtcaaaacggcagtataaagaagcagctgcacagctg
gaggcagtgaaccaactatgcagtcattttgaagcctatagagatgtgcccaagataaca
gagctgagagagaaattcaagaatatcaagaaaatcctcaaatctcatgtattttcagat
ttttcaagcttaggaactgggaaggaaacagaagatcccatgctattacagcagctatct
gatgcttgcttggtggttgatgcactggagccatctgtaagggaagaactagtgaagaac
ttttgcagcaaggaactcacctcatataggcagatctttgaaggagcagaacttgccaaa
ttagacaagactgaaagaagatatgcgtggattaaacgtcgactaaggtcaaatgaagac
acctggaaaatatttccactttcctggcatgtcgactatctgctgtgtatccagttctgt
aagattacaagggcccagcttgttgatatccttaataatctcaaagaaaaaccagatgtg
gcaactttgttattggcgttccagagaacccttgaatttgaggaagaattggcagagaaa
ttcagtggtggaactacgaatgctagaaataaagagacagcaagtgatgacgaagatgag
ggcggggaacacaataaaattgtttcagacatacggaagaaatatgagaagaaactggca
ggacccagtgatgaagctgtacaagacaaagataagcagaaagatttgtcggttcccggt
gctgggttcaacttccatgggatcatatcttcttgttttgaaccgtatatgactgtgtac
attgaacttgaggaaaaatctttagtggatcaattagaaaaacttgtccaggaagaaaga
tgggaaacagaggaaggaagtcaaacgaacattctatcaagcagcatgcaggtattcttg
gtgatcagaaaaagcttaaagcggtgcagcgcattgacaaagaaccaaacattgttcaac
ttatttcaggtatttcaaagaatactcaaggcctatgcggctaagttatatgctagatta
ccaaaaggtggaactggtattgttgcagctgccactggtaccgatgggcagatcaggacc
tcagacagggacgagagaatgatatgctacatcgtcaacactgctgaatattgtcaccag
acatctggtgaactagctgagaatgttgctaagatgattaaccctcagtttgctgacaag
gtggacatgtctgaagttcaggatgagttctcggccgtgatcacaaaagcattaatgact
cttgttcacggacttgaaaccaaatttgatgctgaaatggttgcaatgactcgtgttcca
tgggctacccttgaaagcgttggtgatcaatcagaatatgtgaatggtatcagctctatt
ctgtcaagcagtattcctgtgcttggtaccctgctttctcctacttacttccagtatttc
ctggacaaacttgcagcctctcttggtcctcggttttatctcaacatatacaagtgcaaa
catatatcagaaactggtgcacagcagatgcttttggacacccaagcagtcaagactatt
ctcctagacatcccagctcttggaaaacagagcacaggtgcagctagctactcaaagttt
gtcagccgggaaatgagtaaagccgaagcactacttaaggtcattttgtcaccagttgat
tctgttgctaacacataccgtgccctcctccccgaaggcacgcctcttgagtttcagcgg
atacttgacctcaagggcttgaagaaagcagaccaacaaactatcctggaggacttcaac
aaacacgcccctgccccagcccccgccatcaaacaccctgtcgttgctccgacggtcgcg
ccaccagttgccacagcatctgtccagatagtaccctcggtggcaactccagccgtttca
atgacgccaagcatggcctccttgaagggagcattggcgaaccaagaggacgttctggcc
cgagctgccgcgcttgggcgcggagcagccaccacaggtttcaagaggttccttgcattg
acggaggcggccaaagatcggaaggacgggccgttccgcaagctcttcaacgcgtaa
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