Entry |
|
Name |
(RefSeq) integrator complex subunit 9 homolog
|
KO |
K13146 | integrator complex subunit 9 |
|
Organism |
sbi Sorghum bicolor (sorghum)
|
Brite |
KEGG Orthology (KO) [BR:sbi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:sbi03041]
8056145
Spliceosome [BR:sbi03041]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
8056145
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:70635892..70640715
|
AA seq |
670 aa
MKLTCLSASGGSYYSPASHLLELEGFRFLLDCPIDLSALAVFAPVPLAGDAGGLIRAVPR
YWLPAAAKAGGVDAVIVSSATGMLGLPFLTGLPGFANTKVYVTEVAARIGKLMMEELVEM
HYEFVRYYGPDTDVSPKWMEGKEFNELMSMLQKAVIEDKENDSACLVPLYSLGNIEECMH
KVQPVKYGEEVCFNGIFMLKASSSGLELGNSTWEIKGPRASITYLPSSVFVSAHALDFDY
SSLKENDVILFSDFSSLNDMDEDNEKLNEHSMDETDSSLCHYSVLRDDGADADEKVPFVC
NNDDITEEIERISFICSCIFDAVKSGGSVLIPIGRLGVILLLLELISEMLHSSSMKVPIF
VISETAEEIFAFTNALPEWLCKSRQEKLFAGEALFGHVELLKEGKLFLFPHLHSKGLLAA
WKEPCIVLCPHWSLRLGPAVHLLRRWHADKRCLLVVEQGNDAELSLKPFMPLAIQVLECS
FLSGIRVGKIDPLLRMLKPKFVLLPEGLKSRCPIQEVPWSFFYYSKGKTIELPNLREEFE
VHLATDVAFRLQPRQLNETTAVARLRTKLLVSNGRFQLASAEKQSDQSKRHLLHCSTIDP
GRLLSALQEKGMVCSFAADDSSTASECSVLITSPGDALVKITSDRTVIYCDNERTCNQIY
DALSSVCKGI |
NT seq |
2013 nt +upstreamnt +downstreamnt
atgaagctgacctgcttgtccgccagcggtggcagctattactcgccggcgagccatctc
ctggagctggaggggttccgcttcctcctcgactgccccatcgacctctccgccctcgcg
gtcttcgccccggtgcccctcgccggtgacgcggggggcctcatccgcgcggtgccgcgc
tactggttgccagcggccgcgaaagcaggcggcgtggatgcggtgatcgtgtcttccgct
acggggatgcttggactccctttcctcaccgggctccccggatttgccaacaccaaggtt
tatgtgacagaggtagcagcaaggattggaaagctaatgatggaggagctggtggagatg
cactatgagtttgtgaggtactatggtccagatacggatgtgtcacccaagtggatggaa
gggaaggaattcaatgaactcatgtcaatgttgcagaaggcagtgattgaagacaaggaa
aatgattcagcttgtctggtgcctctatacagtctaggaaacatagaagaatgcatgcac
aaagtacagcctgttaaatatggagaggaggtttgcttcaatggaatatttatgctgaaa
gcttctagttcgggccttgaacttggcaattctacctgggaaataaaaggtccaagagct
agcattacctacctaccaagttcagtctttgtgtcagctcatgcattagattttgattac
agctctctgaaggaaaatgatgtgattttgttttctgatttctcatccttgaatgacatg
gatgaggataatgagaaactgaatgagcattcaatggatgaaacagactcttccctatgt
cactactcagtgttgagggatgacggtgctgatgcagatgaaaaggtgccattcgtgtgc
aacaatgatgatatcacagaggagattgagagaatcagctttatatgctcatgtattttt
gatgcagtaaaatctggaggctctgttctaataccaattggccgccttggtgttattctt
ttacttttggagcttatatcagaaatgctacattcttccagcatgaaggtacccatattt
gtgatttctgaaacagcagaagaaatatttgcttttaccaatgccttgcctgaatggcta
tgcaagtcacgtcaagaaaagctatttgctggcgaggcattgtttggccatgtcgagctt
ttgaaggagggcaaattatttttgttcccacatttacactcaaagggcttgctggcagca
tggaaggagccttgtattgtgctctgtccacattggagccttaggcttggcccagctgtc
catttgcttcgtcgctggcatgcagacaaacggtgccttcttgttgtggagcaaggaaat
gatgctgagttgagtcttaagcctttcatgcccttggcaattcaggtccttgagtgttct
ttcctttctggcataagggtgggaaaaattgatccattactgagaatgctcaaaccgaag
tttgtattgcttcctgaaggtcttaagtcgcggtgtccaatacaggaggtgccatggtca
ttcttttattactccaagggcaagaccatcgagctcccaaatttacgtgaagagtttgag
gtgcatcttgcaactgatgttgccttcagattgcagcctagacaactgaacgaaaccact
gcagtggcaagattgagaacaaagctgcttgtaagcaatggacggttccagctggcttct
gcagaaaagcaatcagatcaatcaaagcgtcacttgctacactgcagcactattgatcca
ggtcgcttgctgtcagcattgcaagagaaggggatggtatgttcatttgctgcagatgat
agctctactgctagtgaatgttctgttctgattactagtcctggagatgccttggtgaag
ataacatctgataggactgttatatactgcgacaatgagagaacatgcaatcaaatttat
gatgcacttagcagtgtttgtaaagggatatga |