KEGG   Sorghum bicolor (sorghum): 8056244
Entry
8056244           CDS       T01086                                 
Name
(RefSeq) lysine-specific demethylase JMJ25 isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbi03036]
    8056244
Enzymes [BR:sbi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     8056244
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    8056244
SSDB
Motif
Pfam: JmjC zf-4CXXC_R1 Cupin_2 AT_hook
Other DBs
NCBI-GeneID: 8056244
NCBI-ProteinID: XP_021313936
LinkDB
Position
4:68256265..68263889
AA seq 1144 aa
MADEAEWIEAEVGNAGAGPPAPGGGEETKRKRGRLKGSLNKNKKSNKDRTPKAKTGTKRR
RRQRTSDRDLSVPVVLGDLGRGVAAGIRQLRERRPAPNAFFDRDSDSYTEHDDDEETMIN
QVNHESAKTGVSVKKRGRGRPRKMEADQLDSKSQSSNGKSNGQMNSNAAGKKRGRGRPKK
LAVEQVFSRCQFSSGETNKSDAEAARSKQSRNHKLLQNAKKRKRDVGKESMRKKLNKVDK
EQKQFPSTKDETLDKNNMKGSKMLTGENALMCHQCQRKDKPRVVQCQSCKKKRFCVPCIE
QWYPNLHEDEFAVKCPYCRKNCNCKACLRMKGVEEPPKKEISKENEIRYACHIVSLLLPW
MRELRQEQMEEKEVEANIRGVSMNEIKVEEAEVDLDDRVYCDRCRTSIVDFHRSCKHCFY
DLCLNCCKELRKGEIAGGEEVEYVPPEPKGRSYSFGKIPLSKDADRSKNSSNGQSYNGMP
AVGNPNNGLLLWKAKSDGSIPCPPKEVGGCGSTLLDLKCLFPEKTLAEIEDRADKVLRSE
TLAKAMVSRSDRCPCFDHSGKIRTESKSLREAASRKDSSDNFLYCPVATGIQDDDIVHFQ
MHWAKGEPVVVSDVLQLTSGLSWEPMVMWRALRERSKGKAEDEQLAVWAIDCLDWCEVEI
NIHKFFSGYTTGRTHARTHWPQMLKLKDWPSSSSFDKRLPRHGAEFISALPFREYTDPRC
GPLNLAAKLPAGVLKPDLGPKSYIAYGLYKELGRGDSVTKLHCDISDAVNILTHTAEVTC
QTDHRQIEKIQKDMREQDLQELYGGLKSCSELKLSPAPTECRDESVDEGLKTSYIREDNC
VNRDNYNGLDINALPPDDDGDDAKDKESSHESESQSELGQCSYHSNGVNTTDGMHSGAHY
ISHNQKSTDSIQLKKVGIKPQGEKSEKVDCSGIDGIDAYLKGSSEDNLEMPVVESSEQQS
TGAGALWDIFRRQDSDKLQDYLRKHCSEFRHIYCNPVKKVFHPIHDQSFYLTQEHKRKLK
EEYGIEPWTFEQKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECVKLTGEFRRL
PSFHKAKEDKLEIKKMALHALNEAVNFLDPCSSEGLKIGVGENSCGDESADEKPMPKRRG
IKES
NT seq 3435 nt   +upstreamnt  +downstreamnt
atggcggacgaggcggagtggatagaggctgaggtcgggaacgcgggcgcgggtcctcca
gcgcccggaggcggcgaggaaaccaagaggaagagggggaggcttaaaggtagcctcaac
aagaacaagaagagcaacaaggataggacgcccaaggccaagaccgggaccaagcggagg
cggaggcagcgcaccagcgaccgggacttgtcggtgcccgtggtgctcggggatctaggg
cgcggggtggcggccgggatcaggcagctcagggagaggaggccggcgcccaatgcgttc
ttcgaccgggacagcgacagctatactgagcatgatgatgatgaggaaactatgattaat
caagtcaaccacgagagtgctaaaacaggtgtttctgtaaagaagagaggaagaggaaga
cccagaaaaatggaagctgaccaactggatagtaagtcccagagttccaatggtaaaagc
aatggccaaatgaattcgaatgctgctgggaagaaaaggggaaggggaagaccaaagaaa
ctagcagtagaacaagtgtttagtaggtgccagttctccagtggtgaaacaaacaaaagt
gatgctgaggcagcaaggagcaagcagtcaaggaatcataaacttctgcagaatgcaaag
aagcggaaaagagatgtagggaaagagtctatgagaaaaaagttgaacaaagtggataaa
gaacaaaagcagttcccatccaccaaggatgaaaccctcgataaaaataatatgaaaggg
agtaagatgttgactggggaaaatgccctcatgtgccaccagtgccagaggaaggacaaa
ccacgggttgtccagtgtcaatcatgcaaaaaaaagcgattctgtgtgccatgcatagaa
caatggtatcctaatttgcatgaagatgaatttgctgtgaaatgcccatattgtcgcaag
aactgtaattgcaaggcctgcctacggatgaagggagttgaagagcctccaaaaaaggag
atctctaaagaaaatgaaattcgttatgcttgtcatatcgtaagcttgctgcttccctgg
atgagagaattgcgacaagaacagatggaggagaaggaagtagaggctaatatacgagga
gtttcaatgaatgagataaaagtggaagaagctgaggttgacctagatgatcgtgtatat
tgtgacaggtgtagaacatctattgttgattttcatagaagctgcaagcattgtttctat
gatctttgtcttaactgctgcaaggagcttcgcaaaggtgagatcgcaggaggagaagag
gtggagtatgtgccacctgaacctaaaggtaggagttattcttttggcaagattcctctg
tcaaaggatgctgatagaagtaagaactcctcaaatggtcagtcttacaacggcatgcct
gctgttggcaaccccaataacggcctgttgctctggaaagcaaagagtgatggtagcata
ccttgtccaccaaaggaagtaggaggctgtggtagtacacttctggacctcaagtgcttg
tttccagagaagacgcttgctgagatagaagatagagctgacaaagttctcaggagtgag
acattagctaaagcaatggttagtagaagtgatcggtgcccttgctttgatcattcgggc
aagataagaactgaaagcaaatcattacgggaggctgcaagcaggaaggactcaagtgat
aacttcctatactgtccagttgctactggtattcaagatgatgacatagtgcattttcag
atgcattgggcaaaaggtgagcctgttgttgtttctgatgtccttcagttaacctctggt
ctgagttgggagccaatggtaatgtggcgggcattgcgggaaagatccaaaggcaaagcg
gaagatgagcaattagctgtttgggcgatagactgccttgattggtgtgaggtggaaatt
aacatacacaagttcttttcgggatatacaacaggcagaactcatgctaggactcactgg
cctcagatgcttaagctaaaagactggccttcttctagttcctttgacaagcgattgccg
cgacatggtgccgaatttattagcgcattgccatttcgtgagtatacagatccacgatgt
ggcccactaaatcttgcagccaagcttcctgctggtgtcttgaagccagatcttggaccc
aaaagttacattgcttatgggctctacaaagagctaggcaggggtgattctgtgaccaag
cttcactgtgacatatctgatgcggtaaatatcttaacacacacagctgaagtcacttgt
cagactgatcaccgccaaattgaaaaaatccaaaaagacatgagagagcaagatctgcag
gaactatatgggggtctaaaatcctgctctgagctgaagttgtcaccagctccaactgaa
tgcagggatgaatctgttgatgaaggattgaagacctcatatattagagaagacaattgt
gtcaacagagacaactataatggtttggacatcaatgctttaccacctgatgacgatgga
gatgatgcaaaggataaagaatcatctcatgaatcagaatcacaaagtgaactaggtcag
tgttcctatcacagcaacggggtcaacacaactgatggaatgcacagtggagctcattac
atttcacacaatcaaaaaagcactgacagtatacaactcaagaaagttggcattaaacct
caaggagagaaatctgaaaaggttgattgcagtggcattgatggcattgatgcttatcta
aaaggaagttctgaagataatctggaaatgcctgttgttgagagctcagagcaacagagc
accggtgccggtgctctgtgggatatcttccgcagacaggattctgataaattacaagat
tatcttaggaagcattgctctgaattccggcatatttactgcaatccagtgaaaaaggta
tttcacccaattcatgatcagtctttctatttaactcaggagcataagagaaagctcaag
gaagaatatggaattgaaccctggacgtttgaacagaagcttggtgaagctgttttcatt
cctgctggatgtcctcaccaagtgagaaatttgaagtcctgcatcaaagttgcgcttgat
tttgtttccccagaaaatgttggtgagtgtgttaagttgactggggagtttagacgactt
ccatctttccacaaagctaaagaagacaaactagagattaagaagatggctcttcatgcc
ctgaacgaagctgtaaacttcttggatccttgttcctcagaagggttgaagattggggtt
ggtgagaacagctgtggagatgaatctgcagatgagaagccgatgcctaaaaggcgaggc
atcaaggagagctga

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