Sorghum bicolor (sorghum): 8056469
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Entry
8056469 CDS
T01086
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8056469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8056469
04121 Ubiquitin system [BR:
sbi04121
]
8056469
03036 Chromosome and associated proteins [BR:
sbi03036
]
8056469
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8056469
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
8056469
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
8056469
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
8056469
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
8056469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
BRCT_2
Motif
Other DBs
NCBI-GeneID:
8056469
NCBI-ProteinID:
XP_002452386
LinkDB
All DBs
Position
4:55290494..55295237
Genome browser
AA seq
543 aa
AA seq
DB search
MSRKRALSEENEGATSLKSLSTPINLFEDECVFCHSFRTSLFHGPMVRYLKGRVVSIDEG
NSSDAIYVHRKCLEWASGVWFKGDIVMNFEPEIRRALKLTCRRCGLKGAALGCYYDPCLT
SFHVPCAVQTIGCRWDVDGYVLCPEHVSNALPCDNLGTQTKENYNASSLDQSRRADKEGN
FDYHNRENQQTDQLNTSNASSLTQSHHCHEDGISTNCSRAGEQTDQLNSSSYIEKEDCFD
SHRRKDQQTDHLNISSPYLPHKLHSHQKEEISTNSSRDDQQIDQLHTSSSSSLPLGACQA
EEMETDQPDTSSCPSDQLVLLGFSLSAEEKDFMQKFASWTNMTLAKEWGENVTHVILGKG
AGTSWSRSSEVLMAILLGKWVVHFEWVADCLQLNPGPEASYELAASKQGRIRASEGLQAP
KLFSGLCFCLSDFMSRDNRDSMRDLIAAAGGRMMLEKRDLHLLLKNPDHSSSSSVKPRPC
YFVYDADSPGEFSVSSLRKEMEEAREQAAAGAQLICHLRVLDAVAAFDAEILVVAKEDRF
ITS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaaaacgtgccttgtccgaagaaaatgaaggtgctacttcactgaagagccta
tcgactccaatcaatttatttgaggatgaatgtgttttttgtcattcatttagaacaagc
ctgtttcatgggccgatggtacgctatctgaagggaagagttgtgtccattgacgagggc
aactcatcagatgccatctacgtccataggaaatgcctcgagtgggcttctggagtatgg
tttaagggcgacattgttatgaactttgagccagaaattagacgtgctttaaaactgaca
tgcagaagatgtggactcaagggagcagcacttggttgttattacgatccttgcctcacg
agttttcacgttccatgtgcagttcagacaattggttgccgctgggacgtggatggctat
gtgctgtgccctgaacatgtttcaaatgctctaccatgtgataatctgggtacacaaaca
aaggagaattacaatgcttcttccttggatcaaagccgacgtgcagataaggaaggaaat
tttgactatcataatagggaaaatcaacaaactgatcagcttaacacctcaaatgcttcc
tcgctgactcagagccatcattgtcacgaagatggaatttctaccaattgctcaagggct
ggtgaacaaacggatcagcttaactccagttcatacatagaaaaggaagattgttttgac
agtcatcgaaggaaagatcaacaaacagatcaccttaacatttcaagtccttatttgcca
cacaaactacattctcatcaaaaagaagaaatttccaccaatagctcaagggatgaccag
caaatagatcagcttcacacttcaagctcttcttccttgccactgggagcttgccaagcg
gaagaaatggaaacagatcagcctgacacatcaagctgcccttctgatcagttggttttg
cttggtttctctttaagtgcggaagagaaggacttcatgcaaaagtttgcaagttggacc
aacatgacgctggcaaaagagtggggcgaaaatgtgacccatgtcattctgggcaaaggt
gctggtacctcatggagtagatcatctgaagtccttatggcaatactgcttgggaaatgg
gtggttcatttcgaatgggtcgccgactgcttgcagctcaatccaggtccagaggcttcc
tatgagctagcagcatccaagcaggggagaatccgagcaagtgaaggattgcaggcaccc
aaactgttttcgggactgtgtttctgcctgagcgatttcatgagccgtgacaacagagac
agcatgcgagacctcatagcagccgccggagggcggatgatgctggagaaacgcgacctg
cacctgctactgaaaaaccccgaccactcttcgtcgtcttcggtgaagccgaggccctgc
tacttcgtgtacgatgccgactcgcccggagagttcagtgtgagctcgctgcggaaggag
atggaggaggcgagagagcaggcggcggctggggcgcagctgatctgccacctcagggtg
ttggatgccgtcgcggcgtttgacgcggagatcctcgtggtcgcgaaggaggaccgcttc
atcacgtcgtaa
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