Sorghum bicolor (sorghum): 8056514
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Entry
8056514 CDS
T01086
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
8056514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8056514
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
8056514
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
8056514
NCBI-ProteinID:
XP_021311051
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All DBs
Position
3:3874471..3884373
Genome browser
AA seq
1231 aa
AA seq
DB search
MEPRRRQQQQSILSFLQKQPPSWRVPSGEGTPPEKPTRPPMGSIAGILERLVRPPPPPPQ
ARNQYASQVRHLEGKNLPVENQVLSNECSGALFSRPIYGEDSRTILSSEGGGDMAPSQEP
QMHSLRSSTDEFIGASTLLPELGSNQAPIQEYPKKLFSESHTNCIQATALNENFDVQTPS
QVASKKIFPGLAHGADTPLTGYGSDQTLLQHSSKKFSLVSANGQYTRAAVTGFGQNSNTT
RAEEPSNMLCSGSSDPLYIRPTNLFAELEANETPLKNHSKNSSLLTNSKYNLASAMLFPG
LDSSPLKPETPAMQPVIPRLKRVQEDQSVDANNQCPPLGALNKKMKSAHCSIERKDHDEM
ADSARSKFEWLNPFAIRDANRRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMD
VVLFFKVGKFYELYELDAEIGQKEFDWKMTANGVGKCRQVGISESGIDDAVDKLVARGYK
VGRIEQMESANQAKARGLHSVIERKLVHVSTPSTAADNIGTDAVHLLALKEVTLASSSSQ
VYGFAFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGITKETQRTIRKYAS
AGSVKMQLTPLSGIDFSDASQIRMLIHSKGFFNASTESWLSALDCAVNRDVVICALGGLI
GHLTRLMLHDALKNGEVLPYHVYKTCLRMDGQTLVNLEIFSNNFNGGSSGTLYKHLNHCV
TASGKRLLRRWICHPLKDIDAINKRLDVVEGFIQNCGLGPTTLGYLRKIPDLERLLGQVR
STVGLSSLLQLPFIGEKILKRRIKTFTMLINGLRNGIDLLSDLQRADHGVLALYKIVEIP
SLNCLCELIHTFEERIQNDFPCGQDPDVDNNGANNLVRLVELFIGKASEWSLVINAVSTI
DVLRSFAAMTLSSFGAMCRPQVLLKDDVPILRMKGLWHPYAFAENANGLVPNDLTLGQDL
SGLNRFALLLTGPNMGGKSTIMRATCLAVVLAQLGCYVPCTSCELTLADSIFTRLGATDR
IMSGESTFLVECTETASVLQNATVDSLVLLDELGRGTSTFDGYAIAYAVFRHLVERVRCR
QLFATHYHSLTKEFASHPHVSLQHMACMFKPRSDGNGQKELTFLYRLTSGACPESYGLQV
ATMAGIPKSIVENASVAGQVMRSKIAENFRSSEQRAEFSTLHEERLREALAVSVQDGLLD
DDIMDTLICVRQELKSHFRKSQMSIHFRKAR
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgcggcggcgtcagcagcagcagtcgatcctctcatttctccagaagcagccg
ccgtcgtggcgggttccctccggggagggcacgcctcccgagaagccgacgcggccccct
atggggtccatcgccggcatcttggagaggctcgtgcgccctccgccgccgccgccgcag
gccagaaatcaatatgcttcccaggttagacatttggaggggaaaaacttgcctgtggaa
aaccaagttctctcaaatgagtgctcaggtgcattgttctcaagacctatttacggcgaa
gacagcagaacaatcctttcctcagaaggaggtggagatatggctccctctcaggagccc
caaatgcactcactgaggtcttccactgatgaatttattggagcaagcacactgttgcca
gaacttggctcaaatcaggctcctattcaagagtatccaaagaagttattctcagagtct
catactaattgcattcaggctacagccttaaatgagaactttgatgtgcaaactccttcc
caggttgcctcaaagaaaatcttcccagggcttgctcatggtgctgatacacctctaact
ggctatggttcagatcaaactcttttgcagcactcatcaaagaagttctcactggtttct
gctaatggtcaatacactagagcagcggtgacaggatttgggcaaaattcaaatactact
cgtgcagaggaaccttcaaacatgctatgctcagggtcttcagatcctttgtatattaga
ccaacaaatttgtttgcagaacttgaggcaaatgaaactccattgaagaatcactcaaag
aattcctctctgcttacgaacagtaaatataacttagcatctgctatgttatttccagga
cttgactctagtcctctgaaaccagaaacaccagcaatgcagccagttattcctcgcctg
aagcgagttcaggaagaccaaagtgtggatgccaacaaccaatgccctcctctgggggcg
ttgaacaagaagatgaaatcagctcattgttctattgaaaggaaggatcatgatgaaatg
gctgatagtgcgcgtagcaaatttgagtggctgaatccatttgccatcagggatgcaaat
agaaggcggccaaatgatccactttatgacaagagtactctttttattccgcctgatgca
ttgagaaaaatgtcaacatctcaaaagcaatactggaatattaagtgcaaatatatggat
gttgtcctctttttcaaagtggggaaattttatgagctctatgaactagatgctgagatt
ggccaaaaagaatttgactggaaaatgactgctaatggggtgggcaagtgccgacaggtt
ggcatttcagaaagtggtatagatgatgctgttgataagcttgtagctagggggtataaa
gttggaagaatagaacaaatggaatctgcaaaccaggccaaagctagaggattacattct
gttatcgagagaaagttggttcatgtgtccacaccatcaactgcggctgataacattggt
actgatgctgttcaccttctggcattgaaagaggttaccctagcttctagcagttcccag
gtctatggatttgctttcctagactatgccgcccttaaaatttgggtgggttcagtccaa
gatgatgactcgtctgcagctttgggtgctttgttgatgcaggtttctcctagagaatta
atctatgaaacctcaggcatcacaaaagaaactcaaaggacaataagaaaatatgcctca
gcaggatctgtgaagatgcagctgacccccctctctgggatagatttctctgatgcttca
caaattcgaatgttaatacattctaaagggttctttaacgcatcgacagagtcatggtta
tctgctttggactgtgcagtgaatcgagatgttgttatttgtgcacttggtggacttatt
ggccatttgactaggctcatgttacatgatgccttgaaaaatggggaagtcttaccatac
catgtgtacaaaacatgtttaaggatggatggccagactcttgtgaaccttgagattttc
agcaacaatttcaatggcggttcatctggtactttatataagcaccttaatcactgtgtc
acagcatctggtaagcggctgctaagaaggtggatttgtcatccacttaaagacattgat
gctatcaataaaaggcttgatgttgttgagggttttatccaaaactgtggactaggccct
acaacacttggttatctccggaaaattcctgatcttgagagattattaggacaagttaga
tccactgttgggttgtcatctttgcttcaactgccctttattggagaaaagatactaaag
agacggatcaaaacatttacaatgcttatcaatggcctccgcaatggtattgacttactc
agtgacttgcaaagagcggatcatggtgtcttggcactttataagattgttgagattcca
tcattgaactgcctttgtgagttaatccatacgtttgaagagagaatacaaaatgatttt
ccatgtggccaggatcctgatgtcgacaacaatggtgccaacaatttggttcgtctggtg
gaactttttattggaaaggcttctgaatggtctttggtgatcaatgctgtcagcactatt
gatgtgcttaggtcctttgctgcaatgacattgtcatcatttggtgccatgtgcagacca
caagttctgctgaaagatgatgtgcctatacttcggatgaagggtctgtggcatccctat
gcttttgcggaaaatgcaaatggcctggttccaaatgatttaacccttggtcaggattta
tctggtctcaatcgttttgcattgttgttaactggtccaaatatgggtgggaaatccaca
atcatgcgtgccacctgcctggctgttgtacttgcacagcttggctgttatgtcccctgc
acatcatgtgagctgacccttgcagattccatctttacgcgccttggtgcaacagatcgg
attatgtctggggaaagtacgtttctcgttgaatgtactgagactgcctctgttcttcag
aacgcaactgtggactcacttgtcttgcttgatgagcttggcagaggaactagcacattt
gatggatatgcaatcgcatatgctgtgttccgccacctagtggagcgtgtgagatgccgt
cagctctttgccactcactaccattctctgacgaaggagtttgcctcgcaccctcacgtg
agcctccagcacatggcctgcatgttcaagccaaggagcgacggcaacggccagaaggag
ctgaccttcctgtaccgactgacctcaggggcctgtccagaaagctacggcctgcaggtc
gccacaatggcagggatcccaaagtcgatagtggagaatgcatctgtcgcgggccaggtg
atgaggtctaagatagctgagaacttcaggtcgagcgaacagcgagctgagttctcgacc
ctccacgaggaacggctgagggaggccctggcggtcagcgtgcaggacggactcctggat
gacgacatcatggacacgctgatctgcgtccgtcaagagctgaagtctcacttcaggaaa
agccagatgagcattcacttcaggaaagccagatga
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