Sorghum bicolor (sorghum): 8056520
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Entry
8056520 CDS
T01086
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
8056520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8056520
Membrane trafficking [BR:
sbi04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
8056520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Syntaxin-18_N
BOS1_GOSR2_MEM11-like_N
JUPITER
ISG65-75
CDH23_a-b
CCDC18_1st
Motif
Other DBs
NCBI-GeneID:
8056520
NCBI-ProteinID:
XP_002457237
UniProt:
C5XMQ4
LinkDB
All DBs
Position
3:complement(4009767..4014689)
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AA seq
340 aa
AA seq
DB search
MNPTRPAQASFRDRTNEFRAAVESARRQSSAPAAASSSSTGPLDGLMAATSARSEFNNRA
SKIGLGIHQTSQKLSRLAKLAKRTSVFDDPTVEIQELTAVIKKDITALNTAVVDLQAICN
SQNESGSLSKDTTNHSTTIVDNLKNRLMSATKEFKEVLTMRTENLKVHENRRQMFSSSAA
NDASNPFIRQRPLVARDPSESSVPPAPWASDSASTPLFQRKKTNGDHGASSSSSQPFAQQ
QQLAVQQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDDNMDDTLTNV
EGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMIFIFFVA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgacgcggcccgcgcaggcgtcgttccgtgaccgcaccaacgagttccgcgcc
gccgtcgagagcgcgcgccgccagtcgtcggcccccgcggcggcgagcagcagctctacc
gggcccctcgatgggttgatggcggccacgtcggctcgctcggagttcaacaaccgcgcg
tccaagatcgggctcgggatccaccagacctcccagaagctaagccgccttgccaaattg
gcaaagagaacatctgtttttgatgaccccacagtggagattcaagagttgactgcagtt
atcaagaaggatatcacggctttgaatactgctgttgtagacctacaagctatctgcaat
tcacaaaatgagagtggcagtctctccaaggacacaacaaatcattccactacaattgtg
gacaaccttaaaaatcgtttgatgagtgcaacaaaagaatttaaagaagttcttaccatg
cgaacagagaatttgaaggttcatgaaaatagaaggcaaatgttctcatcatcagctgca
aacgatgcgtcaaatccattcatccgccaacgaccccttgttgctagggatccatcagag
tcctctgtgcccccagcaccatgggccagcgactctgcatctaccccattattccagagg
aaaaagactaatggagaccatggggcatcatcatcatcatctcagccttttgcacagcag
cagcaattggctgtacagcaggacagttatatgcagagcagagctgaggctcttcaaaat
gtggaatcaacaatccatgagctgagcaacatatttacacaattagcaaccatggtttct
caacagggagagctagcaatcagaattgacgataacatggatgacacactgactaacgtg
gagggagcacagggccagctcctgaagtacctcaacagcatttcatccaacaggtggctg
atgatgaagatattctttgtgctgatggtgttcctcatgatcttcatattcttcgtcgct
tga
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