Sorghum bicolor (sorghum): 8056565
Help
Entry
8056565 CDS
T01086
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8056565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8056565
03036 Chromosome and associated proteins [BR:
sbi03036
]
8056565
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
8056565
Coactivators
SAGA/TFTC/STAGA complex
8056565
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
8056565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
8056565
NCBI-ProteinID:
XP_002457282
LinkDB
All DBs
Position
3:complement(5013510..5023915)
Genome browser
AA seq
738 aa
AA seq
DB search
MSKAPDDQLQATEQEESVHPSQQAGQQHVNTPDQISKTELTEGSKNEQPVQVEQQNSNLQ
QAHSEIQLQQAETNSFQLAEKETGYFGQQSFAGAKVDVAQPSVVQQNVKQTVGQQASSGA
QDTRKGPSIPFNLLIPILQAHLDRDKDMQLQAVWAKLRRNEVHKDDFLRVIRNIVGDQML
KQAAHKVFVQMQAQAQRNSQANPSQQSLFSQVSSQQMPSSGSTQTQNSVHYLAHDNTNQN
PDAKGTNAVPNQPPRMNTAVPLQAKNKQHQPTQLQQASQQIYGASNPGAQAYPRSITGSL
RSPSPVPETQPSMHAPGMAPAKIVPPPTHPMMQHNAVAWQMHQNKELKTNAPPPNAIVKQ
NSESVGKARMAGTGNSSAKGKQGTPNSTPNASGGAKSKKSGGQKKSLEAAGSTQPSSKKQ
KTSGAFQEQSIDQLNDVTAVSGVNIREEEEQLLSAPKEESLASQEARRIAQEEEENLFLR
KGPLLKKLAEIARKCDLKNISGDVEHCLSMCVEERLRRLISTLIRVSKQRIDTEKTGHRL
VITSDVGRQILQMNQKAKEEWDKKQAEEADKNKKQTEADGSGATDLEKEKEESRPKNVKP
NKEEDDKMRTNAANVAARQAVGGSDMLSKWQLMAEQARQKREGLDVSAASQPGRGPGSRP
FLKFGNGPGEHQEGSKRSHSVAFGTGGMKRPGRTPFAGPQRLISVKDVICALEREPQMTK
SRLIYRLHERFPVDSTVD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagctccagatgatcagttgcaagcaacagagcaggaagaaagtgtccatcca
agtcaacaagcagggcaacaacatgttaatacaccagatcagatctccaaaacagaacta
actgaagggtcaaaaaatgaacaacctgtccaagtagagcaacagaattccaacctacaa
caagcacattcagaaattcaactacaacaggctgaaacaaatagcttccagttagctgaa
aaagaaacagggtattttggtcaacagagttttgcaggtgccaaggtggatgtagcccag
ccttcagtagttcagcagaatgtaaagcaaactgttggtcaacaagcatcatctggtgct
caggatacaaggaaaggaccatcaataccatttaatttgttaattccaatcctacaggca
catcttgacagagacaaagatatgcagcttcaagctgtatgggcaaaacttaggcgtaat
gaagtccacaaagatgatttcttaagagttatcaggaatattgttggggatcaaatgctc
aagcaggcagctcataaagtttttgtacagatgcaagcacaggcgcaaagaaatagccag
gcaaatccaagtcagcagtctttattctctcaggtttcttcacagcagatgccttccagt
ggttccactcaaacgcagaacagtgtacactatcttgctcatgataacactaaccaaaac
cctgacgcaaagggaacaaatgctgtaccaaatcaaccacctagaatgaacacagcagtt
ccattgcaagcaaagaacaaacaacatcaaccaacacagttgcagcaggcctcacagcaa
atatatggagcaagtaatcccggtgcccaggcttaccctcggtcaatcactggttctctt
agatcaccgagtcctgttccagaaacacagccatccatgcatgctcctggaatggctcct
gcaaaaatcgtccctcctcctactcatccaatgatgcagcacaatgcagttgcatggcaa
atgcatcaaaacaaggaattgaaaactaatgccccccctccaaatgctattgttaagcaa
aattctgaatctgttggcaaagcacgcatggctggcacaggaaattcttcagctaaagga
aaacagggaactcctaactctacacccaatgctagtggaggtgcaaagagcaagaaatca
ggtgggcagaagaaatcattggaagcagcaggctctacacaaccttcaagcaaaaagcag
aagacatctggagccttccaggaacaaagcattgatcaacttaatgatgtcacagccgtt
agtggtgttaatatcagggaagaggaagagcaattactgtctgcccctaaggaagagagc
cttgcctcacaagaagcacgaagaattgcacaggaagaagaagaaaatcttttcctaagg
aagggtccactcctgaagaaactagcagaaatcgctcggaaatgcgatctgaagaatatt
agtggcgatgtggaacactgtttatcaatgtgtgtggaggagcgtttgcgaagactcata
agtactctcatacgagtctcaaaacagagaatcgatactgaaaagaccgggcatcgacta
gttattacttcggatgttggtcgtcaaattttacagatgaatcagaaagctaaggaagaa
tgggataaaaaacaagcagaagaagctgacaagaacaagaaacaaactgaggctgatggc
agtggtgctaccgatttggaaaaagaaaaagaggaaagtcgcccaaagaatgtcaagccc
aacaaggaagaagatgataaaatgagaacaaatgctgctaatgttgctgcccggcaagct
gttggaggaagtgatatgctgtcaaagtggcagttgatggctgagcaagccaggcagaag
cgagaaggccttgatgtgtctgctgcttcacagccaggcagaggacctggttccaggcca
ttcttgaaatttggaaacggtcctggcgaacaccaggaaggttcaaagaggagccattcg
gtggcattcggaactggaggcatgaaaagaccaggcaggacaccttttgctggtccacag
cgattgatctccgtgaaggatgtcatttgtgcccttgagagggagcctcagatgacaaaa
tcacggctcatctaccggctgcacgagcggtttcctgtagattcaactgtagattag
DBGET
integrated database retrieval system
