Sorghum bicolor (sorghum): 8056600
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Entry
8056600 CDS
T01086
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8056600
Enzymes [BR:
sbi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
8056600
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
8056600
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
ARM_KNTC1_3rd
FitA-like_RHH
Motif
Other DBs
NCBI-GeneID:
8056600
NCBI-ProteinID:
XP_021318410
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Position
6:complement(53259602..53264184)
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AA seq
543 aa
AA seq
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MAEASASAEAEARSILERAAESSFPPLHAVHHLLSVGVCVRCILRLLGAYSSACSYASLT
ASVLHSFLEEHDDSMKGDSCPCLSMNDAYCSVCLGVLLPAFHRDEGLETPNGISHIDNIS
SMISQVVQREGYQVDEFSLEISLPPVIAANERAIRLYMKQKYVNENWFKDKMFPQQTISV
KEALRLLIAPSLEKLTNAKHGNNSFRIRLAYTHGDASQKLHSLLPNEHSRKRKTDSRNGG
DTSNEAHKRNSADGNNKQSSESDSFIYKTLEGIQDQEFCNVFQLPPEKVFKPCHLVISCL
RSPIFLGGRYLKLSRNVSQSCWIIDDERMGEASVEEIVGENVRAICRGDSCKFHAAGRED
IDVRMLGSGRPFLVEVLNVRSIPSETEVQQIEERINNSEKKYVRIRNLKLVGNEIWTMMR
EGEAEKQKQYTALIWTSRDLTEDDLHNISITKDMEIVQKTPIRVLHRRSPLERKRIIHWM
EIEKVAGSSTYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDVKMD
FLQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccagtgcatcggcggaggcggaggctaggagcatccttgaacgcgcagcg
gagtcttccttcccgccgctgcacgccgtccaccacctcctttccgtcggggtctgtgtg
cgctgcatcctgcgcctgcttggagcctatagcagtgcctgctcatatgcatctcttacg
gcatcagttttgcattcgtttcttgaagaacacgacgattccatgaaaggagattcctgt
ccatgtctgtcgatgaatgatgcatattgctctgtctgcttgggagtattgctgccagcc
ttccatcgagatgaaggtctggaaacacctaatggcatttctcatattgacaacatctct
tcaatgatatctcaagtagtgcaaagggagggttaccaagttgatgagttttctctagaa
atttcactaccgccggttatagccgctaatgagcgtgcaattagattatatatgaaacaa
aaatatgtcaacgagaattggttcaaggacaaaatgtttccacaacaaacaatttcagtg
aaggaagccttgcgacttttgatagcaccatcactcgagaaactaacgaatgcaaaacat
ggtaacaattcatttagaattcgcttagcatatactcacggtgatgcttcacaaaagctt
catagtttactgccgaatgagcacagccgtaaaaggaaaacagattcaagaaatggaggt
gatacttcaaatgaggcccataaaaggaattcagcagatggcaacaataaacaatcaagt
gaatcagattcattcatctacaagactcttgagggcatccaagatcaagaattctgtaat
gtatttcaattgcctcctgaaaaggtgttcaaaccctgccatcttgtaatatcatgcttg
aggtcacctatatttcttggtggaagatatttgaagctttcaaggaatgtcagtcagtca
tgttggataatagatgatgagagaatgggtgaagcttcagttgaggagatagttggggag
aatgttcgtgccatctgcagaggtgatagctgcaagttccatgctgctgggagagaagac
attgatgtacggatgcttggatctggtcgtccatttctagttgaagtattgaatgttcga
tccattccatctgaaactgaagttcaacaaattgaagagagaatcaacaactctgaaaag
aaatatgtcagaattcgaaatctcaagttggtaggtaatgaaatatggaccatgatgcgt
gaaggagaagcagagaaacagaagcagtatactgcccttatatggacttctcgtgatctg
acagaggatgatctgcataatatttctattacgaaggatatggaaattgtacagaagacc
ccaataagagtacttcatcgtagaagcccattagagcggaagcgcattatacactggatg
gagattgagaaagttgcaggcagctcaacttactacttgctgcatctatgcacacaggct
ggaacatacatcaaagaatttgtgcatggtgatcttggacgcacgcaccccagcatcgga
gccatcctagggtgcagagctgagatattgcaactcgatgtcactgatgttaagatggac
ttcctccagtag
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