Sorghum bicolor (sorghum): 8056608
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Entry
8056608 CDS
T01086
Name
(RefSeq) protein argonaute 1B isoform X2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8056608
03036 Chromosome and associated proteins [BR:
sbi03036
]
8056608
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8056608
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8056608
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8056608
microRNA pathway
RISC loading complex
8056608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
Gly-rich_Ago1
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
8056608
NCBI-ProteinID:
XP_002448347
LinkDB
All DBs
Position
6:complement(53559391..53577571)
Genome browser
AA seq
1077 aa
AA seq
DB search
MVRKKRTGPGGSGETSGESSGGSGQGSSQRPERTQQPGGGRGWVPQQGGRGGGQHQGRGG
HYQGRGGPGSHHPGGGPPEYHPREYQGRGGEYQGRGGEYQGRGGARSRGGMPQPYYGGHR
GGNVGRNVPPGPSRTVPELHQAPYVQYQAPVVSQSPSGPGSSSQPVAEVSSGQVQQQFQQ
LAIRGQSSTSQEIQVAPASSKSVRFPLRPGKGTYGDRCIVKANHFFAELPDKDLHQYDVS
ITPEVTSRGVNRAVMGELVRLYRISHLGGRLPAYDGRKSLYTAGPLPFTSMTFEITLQDE
EDSLGGGQGGQRRERVFRVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPT
ARYSPVGRSFYSPNLGRRQQLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVI
DFVAQLLNRDISVRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELSF
PVDDRGTVKTVVQYFMETYGFSIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLN
EKQITALLKVTCQRPQERELDILQTVHHNAYYEDPYAQEFGIRIDERLAAVEARVLPPPR
LKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVSNWACINFSRNVQDSAARGFCHELAVMC
QISGMDFALEPVLAPVTARPEHVERALKARYQDAMNVLRPQGRELDLLIVILPDNNGSLY
GDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPLV
SDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKV
WQDPQRRTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACA
SLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYL
CSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAA
FRARFYMEPDTSDSGSMASGARGPPPGGARGIRGAGSVAVRPLPALKENVKRVMFYC
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaactggccctggtggctctggagaaacttctggagagtcttca
ggaggttctggacaaggttcttcacagcggcctgagcgaactcaacaacctgggggagga
cgtggctgggtgcctcaacagggtggtcgtggtggcgggcaacaccagggtcgtggtgga
cattatcagggccgcggaggacctgggtcacatcaccctggtggtgggccccctgagtat
cacccgcgtgaataccagggacgtggcggtgaatatcagggacgaggtggtgagtaccag
ggacgtggtggcgcccgctccagaggtggaatgccacagccatactatggtgggcatagg
ggaggtaatgttggacgaaatgttcctccaggtccttctagaacagttcccgagctgcac
caagccccttatgtccagtatcaagccccggtggtttcacaatccccatcgggacctggc
tcatcctcacagcctgtggcagaggtgagctctggacaagtccagcaacagtttcagcaa
cttgccattcgtggtcagtcttccacgagccaagaaattcaagtggcaccagcatcaagc
aaatcggttcgattcccattgcgccctggcaagggcacttatggggacaggtgcattgtg
aaggcaaatcatttctttgctgagcttcctgacaaagaccttcaccaatatgatgtatct
ataacacctgaggttacttcacgtggtgttaatcgtgctgtcatgggagagcttgtaaga
ctatatagaatttcccatttgggtgggcgtctacctgcgtatgatggaagaaagagcctt
tataccgctggaccattgccatttacttctatgacatttgaaattacgttgcaagatgag
gaagatagtcttggtggtggccaaggtggacaaaggcgcgagagagtatttagggtggtg
atcaaatttgcggcccgtgctgatctccaccatctggctatgtttctagctggaaggcaa
gcggatgctcctcaagaagctcttcaagtgcttgacattgtactacgtgaattgcctact
gcgaggtattctcctgttggtaggtcattttattctcccaacttagggagacgccagcaa
cttggtgagggtctggaaagttggcgtggcttttaccaaagcataaggccgacacagatg
ggcctttcactgaatattgatatgtcctctaccgcatttatcgagcctctccctgtgatc
gattttgttgctcagcttcttaacagagatatctcagttagaccattgtctgattctgat
cgtgtgaagatcaaaaaagccctaagaggtgtgaaggtcgaggtcactcacaggggaaac
atgcgcagaaaatatcgcatttctggcctaacctcacaagcaacaagagagctatcattc
cctgttgatgatcgcggtactgtgaagactgtggtgcaatacttcatggagacttatggt
tttagtatccagcacaccactttaccgtgcttgcaagtgggcaatcaacaaagaccaaat
tatcttccaatggaggtttgcaaaatagttgaaggacagcgctactcaaagcgactcaat
gagaagcaaatcactgctctactgaaagtgacctgccagcgccctcaagagcgtgagctg
gacatcttacagactgtgcatcacaatgcatactatgaagacccatatgcacaggaattt
ggcataagaattgatgaacgtcttgcagcagttgaagctcgtgttctgccaccaccaagg
cttaaataccatgatagtggccgagagaaggatgttttgcccagagttggccaatggaac
atgatgaataagaaaatggttaatggtggcagagtcagcaactgggcatgtattaacttc
tctcggaatgtgcaagatagtgctgctaggggtttctgtcacgagcttgcagtcatgtgc
caaatatcaggaatggattttgctcttgagcctgtgctcgctccagtgactgcaagacct
gaacatgttgaaagggcgttaaaggcccgttatcaagatgcaatgaacgtattgaggcca
cagggcagggaactcgatctgctgattgtaatactgcctgacaataatggttctctttat
ggggatctcaaaaggatctgtgagactgatcttggattggtctcccagtgttgtctgact
aaacatgtttttaagatgagcaagcagtatcttgcaaatgttgcactcaaaataaatgtt
aaggttgggggaaggaatactgtacttgtagatgctttgacaaggagaatcccccttgtc
agtgacaggccgaccataatatttggtgctgatgttacccatccacatcctggagaagat
tccagtccttccattgcagctgttgttgcttcacaagactggcctgaggtcaccaaatat
gctggactagtgagtgcccaagctcatcgccaggagctgatacaggatcttttcaaagta
tggcaagacccacagagaaggacagtaactggtggcatgataaaggaacttctcatttct
ttcaagagggcaactggacagaagccccaaaggatcatattctacagggatggtgtcagt
gagggacagttctatcaagtattgttgtatgaacttgatgccatcagaaaggcctgtgca
tccctggagcccaattaccagcctccagttacttttgtcgtggtccagaagcgacatcac
actaggctgtttgctaataaccacaatgaccagcgtacagttgatagaagtggaaacata
ctgcctggcaccgtggttgattccaagatttgccatcctacggaatttgatttctacctg
tgtagccatgccggcattcagggaacaagccgccctgctcattaccatgtcctgtgggat
gagaacaagtttacagctgatgagctgcagactctgacaaacaacctgtgctacacgtac
gctaggtgcactcgctccgtgtcaattgtgcccccggcatactatgctcatctggcagcc
ttccgagctcgcttctacatggagccagatacctctgacagtgggtcaatggccagtggg
gcccgtgggcctccaccaggtggggcacgcggcatcagaggggccgggagtgttgcggtc
aggcccctacccgctctcaaggaaaacgtgaagcgtgtcatgttttactgctga
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