Sorghum bicolor (sorghum): 8056867
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Entry
8056867 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8056867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8056867
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8056867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
8056867
NCBI-ProteinID:
XP_002468247
UniProt:
C5WSM7
LinkDB
All DBs
Position
1:complement(72804040..72815842)
Genome browser
AA seq
1477 aa
AA seq
DB search
MAWGEDEAIGPDVASAGLHVSERIGRDAAAQPDLEEALEASRYASHPYSSHPKEWPSLVE
VAETRQLPPMVIERYNTVAGEGTALCGIFSDIHRAWATVDNSFFVWRFDKWDGQCQEHNV
DDQAICAVGLARAKPGIFIEAIQYLLVLATPVELILVGVCCSASADGTDPYAELSLQPLP
EYMIATDGVTMTCITCTDKGQIFLAGRDGHIYELQYTTGSGWRKRCRKVCLTTGIGSLLS
RWVLPNAFKFSTVDPIVDMVMDEERNTIYARTEGMKLQLFDLGANGDGPLTKIAEEKNIV
DPRDAPYGGRRPNARRAAQSPKPSIVCISPLSAMESKWLHAVAVLSDGKRLFLTTSGGSG
SSVGLNSGLQRPTCLKIVATRPSPPLGVGGGLTFGAVSAAGRAHPEDLALKVESAFYSAG
ALIMSDSSATAMSSLLAVQKDSAAQLSLPSTFGTASRTSRALRETVSALPVEGRMLCASD
VLPLPDAAYTMQSLYADVECFTGFRKPSEKACIKLWAKGDLPTQHILPRRRVVVFNTMGL
MEVIFNRPVDILRKLFDGNTLRSQIEEFFNRFGAGEAAAMCLMLAAKLLYAEDSLISNAV
SEKAAEAFEDPGLVGMPQIDGTTALSNTRTQAGGFSMGQVVQEAEPLFSGAYEGLCLCSS
RLLYPIWELPVMVIRGPAGTNKREDGVIVCRLSAGAMKILESKIHSLETFLRSRRNKRRG
LYGHVAGLGDSGSILYKTGPIIGPGGHINGRSPYNSQIRDMNPADKSASNKKPRLLYTSA
ELAAMEVRAMECLRRLLRRSGEALFLLQLICQHNVARLAQTLGNDLRKKLVQLTFHQLVC
SEDGDQLAMRLISALMEYYIGPEGRGTVEEISTKLREGCPSYFNESDYKYYLAVECLERA
SMTNNPDERDILARDAFNLLTKIPDSADLSAICKRFENLRFYEAVVRLPLQKAQALDSNA
DVINGQIDPRHHDTIMLQRQQCYEIVMNALRTLKGVGHSRMQSADKSSGLATAVDPASRS
KYIKQIIQLSVQWPDTVFHEHLYRTLIELGLENELLEYGGSDLVSFLQSAGRKHQEEVRS
ISSVTSGAAKLHDLGAPISTSQTKYLELLARYYVRKGEHIAAARMLLILAERQCSNSEEA
PTLDKRYEYLRDAVLQAKSAGISADSSRNPIDSSTVDLLEGKLAVLRFQMQIKQELELMA
ARIENIPSSSESPSVPFPRDNILADAETAKAAKDKANELSLNLKSITQLYNDYAVPFGLW
EVCLEMLSFANYSGDTDSKIVREIWARLLDQTLTKGGVAEACSVVKRVGSKLDPADGACL
PLDIICLHLEKAALDRLSSGEELVGDDDVSRALLGACKGLPEPVLAVYDQLLSNGAIIPS
LNLKLRLLRSVLAILREWGISVVAHRLGTTSAGASFFLDGTFSMNQTGTANQGARDKIIS
LANRYMTEVRRLNLPQNQTEDVYRGFRELEEKLLSPY
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggggggaggacgaggccattggccccgacgtggcctcggcgggtcttcacgtc
tcggagcggatcggccgcgacgccgccgcgcagcccgacctggaggaggcccttgaagcc
tcgcgctacgcgtcccacccctactcctcgcaccccaaggagtggccttctttggtggaa
gttgcagaaactcgtcaacttcctcctatggtgattgaaagatataacacagttgccggt
gaaggaacagctctttgcgggattttttctgacatacatcgggcctgggcaacagttgac
aattcatttttcgtctggcgttttgataaatgggatgggcagtgccaagagcataatgtt
gatgatcaagcaatttgtgctgttggccttgctagggcaaagcctgggattttcattgaa
gccattcaataccttttagttttagcaactcctgttgagctgatacttgttggagtttgc
tgttctgcaagtgctgatggaacggacccatatgctgagctttcattacaacctttaccc
gagtacatgattgccactgatggtgtcacaatgacatgcatcacatgtacagacaaaggc
caaatttttctagctggtcgcgatggccatatatatgaattgcagtatacaactggttca
ggttggcgtaaacgctgccgtaaagtttgtcttactactggtattggcagccttctttct
aggtgggtactgccaaatgcattcaaattctcaaccgttgatccaattgttgatatggtc
atggatgaggagaggaacactatctatgcgcgtaccgagggcatgaaattgcaattattt
gatctaggagctaatggtgatggccctttgacaaaaattgctgaagaaaagaacattgtt
gatccacgggatgcaccctatggtggtcggaggcctaatgcgcgaagagctgcacaatca
ccaaaaccatcaattgtttgcatctcacctctatctgctatggaatcaaaatggctccat
gctgttgctgttttatcagatgggaagagattattcctcactacatccggtgggagtggt
tcttctgttggattgaacagtggtctgcagaggccaacctgtttaaaaattgttgctact
aggccgtccccacctctgggggttggtggtgggcttacatttggtgctgtttctgcggct
ggcagagctcatcctgaggatctagctttgaaagttgagtctgctttctattctgctggt
gctcttataatgtcagattcatctgctacagccatgtcatctcttctggctgtgcagaaa
gattcagctgcgcagctatcccttcccagtaccttcggaacagcttctagaacctcccga
gctctacgagaaacagtctctgctttgcctgttgagggtcgaatgctttgtgcctctgat
gtcttaccacttcctgatgctgcttacacgatgcagtctttgtatgctgatgtggaatgc
ttcacaggtttcagaaaaccctctgagaaggcatgtataaaactgtgggcaaaaggagat
cttcctacccagcacatcttgcctcggaggagggttgttgtattcaatactatgggtttg
atggaggtaatttttaacaggcctgttgatattctaaggaaattgtttgatgggaacacc
ctgagatcacaaattgaagaattctttaatcgctttggtgctggagaggctgcagcaatg
tgcttaatgctagctgcgaagctactttatgctgaagatagtctgataagcaatgctgtt
tctgagaaagctgctgaggcatttgaggaccctgggcttgttgggatgcctcaaattgat
ggcaccactgctttatctaatacacgaactcaagctggaggctttagtatgggccaagtt
gttcaagaagcagaacctttgttttctggtgcatacgaaggcctttgtttgtgctcgtca
agactactttatcccatatgggagctccctgttatggtgattcgaggaccggctggtact
aataaacgcgaggatggcgtaattgtttgcaggctttcagctggggccatgaaaattctt
gagagtaagattcattctctggaaacatttttaagatctagaaggaacaagagaaggggc
ctttatggtcatgttgctggtcttggcgattctggttccatactctacaaaacagggcct
attattggtcctggagggcatatcaatggcaggagcccatacaactcccaaattcgagat
atgaaccctgcagacaaatctgcatcaaataaaaagccaaggctactttatacatcagca
gaactagctgctatggaggtgagggcaatggagtgtcttaggcggttgcttaggagatct
ggtgaagcactctttctgcttcaacttatttgccagcataatgttgcccgtttggctcag
acgctgggcaatgatttacgcaagaaattagttcagttaacatttcatcaattggtatgt
tcggaggatggtgatcagcttgcaatgcgtcttatttctgcactcatggagtactatatt
ggcccagagggcagaggaactgttgaagaaatcagtacgaagttgagggagggttgccct
agttacttcaacgagtcagactacaaatattacttggcagtggagtgccttgagagagca
tctatgactaataaccccgatgagagagatattcttgctagagatgctttcaacctcttg
actaaaattccagactctgctgatttgagtgccatatgcaagagattcgagaacctaaga
ttttacgaggctgtagtccggttgcctctgcagaaagctcaagcacttgactccaatgct
gatgttatcaatggtcaaattgatccaaggcatcatgataccataatgttgcagcgtcaa
caatgctatgagattgttatgaatgctctgcggactctcaagggtgtcgggcatagtcga
atgcaaagtgcagacaagtcatctggtctagcaactgctgttgatccagcttctcgaagc
aagtacatcaaacaaattatccaacttagtgtccaatggccagacacagttttccatgag
catctatacagaacactaattgagctcggtctagaaaatgagcttttggagtatggtggt
tctgatttggtttcttttctgcagagtgctggtcgtaagcatcaggaagaggttcggtca
atttcttcagttacatctggagctgctaagttgcatgatttaggtgcacctatctcgact
agtcaaacaaagtatcttgagctcctagctaggtactatgttcgcaagggggagcatatt
gctgctgccaggatgttgttaatattggcagagcgacagtgctccaattccgaagaagct
ccaactcttgacaagaggtatgaatatctcagagatgcagtgcttcaggccaaaagcgca
ggcatctctgctgattcgtctagaaatcctattgatagtagcacagtggatttgcttgaa
ggcaaacttgccgtgctacgcttccaaatgcaaatcaaacaagaattggagctcatggct
gcgcggattgaaaatattccaagcagttctgaatcacctagtgttccattccctcgggac
aacattcttgccgacgcagagactgctaaggctgctaaggataaggcaaatgaactatca
ttgaatctcaagagtatcactcaactgtataatgattatgctgttccatttggtctctgg
gaggtttgcctggaaatgctgagctttgctaattactctggagacactgatagcaaaatt
gttcgagaaatttgggctagactccttgatcagacacttacaaaaggtggtgttgcagaa
gcatgttctgtggtgaaaagagtaggctcgaaacttgatcctgcagatggagcttgttta
cctttagatataatatgccttcatcttgagaaggctgcattggatagattaagttcagga
gaagaattagttggtgatgatgatgtttcaagagctcttcttggtgcctgtaaaggtctt
cctgaacctgtacttgctgtatatgatcaactgttatctaatggtgcaatcataccctca
ctaaatctgaagttgcgcctgctgcgatcagttcttgcaatcctccgtgagtgggggata
tctgtcgttgcacataggctaggcaccacaagtgctggggcttcattctttcttgatgga
acattctcaatgaaccaaacagggactgcaaatcaaggtgctcgagataaaataattagt
ttggcgaacaggtacatgactgaggtgaggcgattaaaccttccacagaaccaaacggag
gatgtctaccgcggtttccgtgaacttgaggagaaattactatctccttattag
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integrated database retrieval system
