Sorghum bicolor (sorghum): 8056897
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Entry
8056897 CDS
T01086
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8056897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8056897
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
8056897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
8056897
NCBI-ProteinID:
XP_002444510
UniProt:
C5YMB3
A0A921QL59
LinkDB
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Position
7:59133872..59141422
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AA seq
763 aa
AA seq
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MSEFLDLETQDGIRMTWNVIPGTKQDATNCVVPVSAIYTPLKPNPSIPVLPYAPLRCRMC
RSILNPFSVVDFVAKIWVCPFCFQRNHFPQHYNSISENNLPAELFPQYTTVEYASTSETG
PVAPPVFLFVVDTCMIEEEIGYLKSALAQAIELLPDQSLVGFITFGTYVQVHELGFGLLP
KSYVFKGTKEVTKEQILDQMSFFAGKTKPTSGVIAGARDGLSAESIARFLLPASECEFVL
NSVIEELQKDPWPVPADKRSSRCTGVALSVAASLLGVCVPGSGARIMAFVGGPSTEGPGS
IVSKSLSEPIRSHKDLDKGSAPLYNKAVKFYEDISKQLVNQGHVLDLFACALDQVGVAEM
KVAVERTGGIVVLAESFGHSVFKDSLRRIFQSSDNDLDLSFNGIFEINCSKDVKIQGIIG
PCTSLEKKSPLSSDTVVGQGNTNAWKMCGLDRKTSLCLVFDIAKKDGPDSVGVGQSASNQ
FYFQFLTYYQHHEGQMRLRATTLSRRWVAGSGGVQELIDGFDQEAAAAVMARLVSFKMEA
EADFDPIRWLDRALISLCSKFGDYHKETPSSFSLSPRLSIFPQFIFNLRRSQFVQVFNNS
PDETAYFTMMLNRENVSNAVVMIQPSLISYSFQSGPEPVLLDVTAIAADRILLLDSYFTV
VIFHGITIAQWRKAGYQYQEGHESFAQLLQAPQEEADAIIKERFPVPRLVVCDQYGSQAR
FLLAKLNPSVSYDNPPAPGGDVIFTDDVSFQVFMDHLQRLAVN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtttctggaccttgagacccaggatgggataagaatgacatggaatgttata
ccaggcacaaagcaggatgccactaactgtgttgttcctgtttctgccatttatactcct
ctaaagccaaacccttccattcctgtccttccttatgcccctctccgttgccgcatgtgc
cgttcgattctcaaccctttctcagttgttgattttgttgcgaagatttgggtctgtccg
ttctgctttcagcgcaaccatttcccccaacattacaactccatttcagaaaacaacctt
cctgctgagctgtttcctcaatataccaccgttgagtatgcatccacttctgaaacgggt
cctgtggcacctccagtcttcctctttgttgttgatacatgtatgattgaggaggagatt
ggctatttgaagtctgctttagcacaagcaattgaactattgccagatcagtcccttgtt
ggatttattactttcgggacatatgttcaggtgcatgaattgggttttggcttgttgcca
aagtcatatgtgtttaaagggacaaaagaagttacaaaggagcaaattttggaccaaatg
agtttctttgctgggaaaactaaacccacatcaggtgtgatcgcaggcgcaagggatggc
ctctcagcagagagtattgctaggttcctgttgcctgcttctgagtgcgagtttgtgttg
aattcagtaatagaagaactgcaaaaggacccttggcctgttccagctgataaacgttca
tcaaggtgtactggagttgcattaagtgttgctgctagtctcttgggggtttgtgttcct
ggatcaggtgctagaattatggcatttgtaggtggtccatctacagagggacctggttct
atcgtatccaagtccctatcagaaccaattcgctcgcacaaagacctcgataaaggttca
gctccactttataacaaagctgttaaattctacgaggatatctctaagcagcttgtgaat
caaggccatgtacttgatttatttgcttgtgcgcttgaccaggttggtgttgctgagatg
aaggttgctgtggagagaactggtggaatagttgttcttgcggaaagttttggtcattct
gtttttaaagactcacttcgacgcatctttcagtcaagtgacaatgatcttgatttatca
ttcaatggtatctttgagattaactgctcaaaggatgtcaaaatccaaggaattattgga
ccttgtacttccctggagaagaaaagccctctatcgtcagatacagttgtaggtcaggga
aacacgaacgcatggaagatgtgtggtctagacaggaaaacatcactctgtttagtattt
gatattgcaaagaaggatggaccagattcggttggtgttggtcaatcagcaagcaatcag
ttctacttccaattcttaacctattaccagcatcatgaggggcagatgagattacgagcc
actacactttctagaagatgggttgctggttctggtggtgtgcaggaactaatagatggc
tttgatcaagaggcagctgctgcagtcatggcacgcttggtctcgtttaagatggaagct
gaggctgattttgacccgataagatggcttgatcgagcattgattagtttatgttcgaaa
tttggagactatcacaaagaaacaccctcatccttcagtttatcccctcgtctgtccata
tttccccagttcatctttaatttgagacgatctcaatttgttcaggtttttaacaacagt
ccagatgaaactgcatatttcacaatgatgttaaacagagagaatgtatcaaatgcagtt
gtgatgatccagccatcacttatatcttattcattccaatcgggtccagagccagttctg
ttggatgtaactgcaattgcagctgataggatccttttgttggattcttattttactgtt
gtcatattccatgggataacgattgcacagtggcgaaaggctggttaccaatatcaagaa
ggccatgagtcatttgcccagttgttgcaagctccacaggaggaagctgatgcaataatc
aaggaacgctttcctgtgcctcgattggtcgtgtgcgatcaatatggttctcaggctcga
tttttgctggcaaagcttaatccatcggtctcgtatgacaatcctccagcaccaggaggg
gatgtcatattcacagatgatgtgagcttccaggtcttcatggatcatctccagcgcttg
gccgttaattag
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