KEGG   Sorghum bicolor (sorghum): 8057260
Entry
8057260           CDS       T01086                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8057260
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    8057260
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 Prok-RING_4 DEAD zf-RING_5 RING_XB3-XBAT31 ResIII zf-RING_4 zf-ANAPC11 RING_ZNF598
Other DBs
NCBI-GeneID: 8057260
NCBI-ProteinID: XP_002452192
UniProt: C5XTC7
LinkDB
Position
4:51224782..51234163
AA seq 1024 aa
MGKEREEQVAMVRAVLGDGTPEMDIIRALHMAGDDPTKAINILLDFNHNAAPPLPPTPTP
TPSPSPSPPPGKPAKALVDSNPPPPPPRKAPTRPMPTAEKSKPAAPTTNGGGGEHWWLVG
SAEMAGLSTCKGRRIASGDAVTFTFPNAAAAVGKSRPGRAALASCSSEIMRFSTSSHGEV
GRIPNEWARCLLPLLKENKLKVKGSCKSAPEVLTIMDTVLLSVSIYINSSMFHDQKQSAP
KAARVAPDDSTFHPLPALFKLIGVAPFIKAAFTPEDLYSRKRPIETKSSIGAPATKLTSE
RLRLSSDGNEDDHGEETVSDSDLDDIIGISDSSALEERAPPDSLLCDLRSYQKQALHWML
QLEKGSSSQDAATTLHPCWEAYKLEDKRELVLYLNVFSGDATTEFPSTLQLSRGGILADA
MGLGKTIMTIALLLSDSSKGCITTQNAAQIPREASGLGESHDDVKKLASPFSFSKHKKPK
APLIGGSNLIICPMTLISQWKAEIEAHTKPGTVSIYVHYGQNRPKEASIIGQSDIVLTTY
GVVSSEFSMDGSTENGALYSVHWFRVVLDEAHMIKSSKSLISLAAAALTADRRWCLTGTP
IQNNLEDLYSLFRFLKVEPWRNWALWNKLVQKPYEEGDERGLKLLQSILKPIMLRRTKNS
TDKEGRPILNLPPANIEVKYCVLSEAEKDFYEALFRRSKVKFDQFVEQGRVLHNYASILE
LLLRLRQCCDHPFLVMSRGDTQEFADLKKLAKRFLRGGNGAVNGDSSCIPSRAYIEEVVQ
ELQKGEGECPICLEAFEDAVLTPCAHRLCRECLLSSWRSATAGLCPVCRKSMSKQDLITA
PTDNRFQIDVEKNWVESSKISALLQELEVLRSSGAKSIVFSQWTAFLDLLQIPLSRNNFS
FARLDGTLNLQQREKVIKEFSEDKGILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVE
EQAVMRIHRIGQTKTVSIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRTARIEELK
MLFS
NT seq 3075 nt   +upstreamnt  +downstreamnt
atggggaaggagcgggaggagcaggtggccatggtgcgcgcggtgctcggcgacggcacg
ccggagatggacatcatccgtgctctccacatggccggcgacgaccccaccaaggccatt
aacatcctcctcgacttcaaccacaacgctgcgccacctctcccgccgacgccgacgccg
acgccgtcgccgtctccctcccctccgccggggaaacccgccaaagccctcgtcgactca
aacccaccaccaccaccaccaagaaaagcccctacccggcccatgcccacggcagagaaa
tctaagcccgccgcacccacaaccaacggtggcggcggggagcactggtggctggtgggg
agcgccgagatggcggggctgtccacctgcaagggcaggcgaattgcctcaggggacgca
gtcaccttcaccttccccaacgccgcagccgccgtgggcaagagccgtccaggccgtgcc
gccctagcttcctgctcctccgagatcatgcgcttctccacctcaagccacggggaggtg
gggcgcatccccaatgagtgggcaaggtgcctccttccccttctcaaggagaacaagtta
aaagtcaagggctcgtgcaaatcagctcccgaggtgcttaccattatggacactgtcctc
ttgtcagtgagtatatatatcaacagttcaatgtttcatgatcaaaagcaatcggcgccc
aaggcagctcgtgttgctccagatgactccacatttcaccccctacctgcacttttcaaa
ttgataggggttgctccttttataaaggccgcctttactccagaagatctttattccagg
aagcgaccaattgaaacaaagagcagtataggagcgcctgccacaaagttgacatccgag
agattgaggttgtcttctgatggaaatgaagacgatcacggcgaagaaactgtttcagat
tcagatttggatgatataattgggatctcagacagctctgcactagaggaaagggctccc
cctgattctctgctgtgtgatctacgctcttatcaaaagcaggcactgcattggatgctg
cagcttgagaaaggtagttcttcccaggatgccgctacaacccttcacccttgttgggaa
gcatacaaacttgaggacaagagggagctagttttgtacttgaatgtgttttcaggcgat
gctacaactgaatttcctagtacattacaactttctagaggagggattctggcagatgca
atgggactggggaagactattatgacgatagctcttcttctttctgattctagcaaaggg
tgcatcacaactcagaatgctgctcagatccctagagaagctagtgggttgggtgaatcg
catgatgatgtgaagaagcttgctagccctttctcttttagcaaacacaagaaacctaag
gccccacttattggaggaagcaatctaattatctgtccaatgacactaattagtcagtgg
aaggcggagattgaagctcatactaagccaggcactgtgagtatatatgttcactatgga
caaaacaggccaaaagaggcgagcatcattggtcagagtgatattgtcctgactacatat
ggtgttgtgtcatcagaattttcaatggatggttcaacggaaaatggggctttgtactct
gtacattggttcagagttgtgcttgatgaagcacacatgataaaatcttctaaaagtttg
atatccctagctgcggctgctttgactgcagatcggcgctggtgtctcactggtacacca
attcagaacaacttggaggatttgtacagccttttccggtttttgaaagttgaaccatgg
aggaactgggctttgtggaataaacttgtacagaaaccatatgaagaaggtgatgaaagg
ggcttaaagctactgcagtccattttgaagccaataatgctgagaaggactaaaaacagc
acagacaaggagggcaggccaatccttaatttaccccctgcaaatattgaagtaaaatac
tgtgttttatctgaggccgagaaggatttctatgaagctctatttcgaagatctaaggta
aaatttgatcaatttgttgagcaaggaagggttctgcacaactatgcttcaattttggag
ttacttttacgcctaagacaatgctgtgatcatccattccttgttatgagtcgtggggat
acacaagagtttgcagacctaaagaagcttgcaaagcgttttctgcgtggtggtaatggt
gctgttaatggtgattcttcttgcattccctctagagcttatatcgaagaggttgttcaa
gaattgcaaaagggtgaaggggagtgccctatttgcctggaagcctttgaggatgcagta
ttaactccatgtgctcaccgtttatgccgagagtgtctcttatctagttggcggagtgca
acagcaggcctttgccctgtctgtagaaagtcaatgagcaagcaggaccttataactgct
cctactgataaccgctttcaaattgacgttgaaaagaactgggttgaatcttccaagata
tctgctctcctgcaggagttggaggttcttcgcagttcaggtgccaagagtatcgtgttt
agccagtggactgcatttttagatcttttgcaaattccactttctaggaataatttctca
tttgctaggctggatgggacattgaatcttcagcaaagggagaaagttatcaaggagttc
tcagaggacaaaggcattttggttctgcttatgtctctgaaggctggtggtgttggaatc
aaccttactgctgcttctaatgcatttgtcatggacccttggtggaatcctgccgtggaa
gagcaagctgtcatgcgcatccatcgaattggtcaaacgaagactgtttctatcagaaga
ttcattgtgaagggcactgtcgaagaacgcatggaggccgtccaggctcgaaagcagcga
atgatttctggagctttgactgaccaagaagtccgcactgcacgtatagaagaactgaag
atgcttttctcttga

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