Sorghum bicolor (sorghum): 8057305
Help
Entry
8057305 CDS
T01086
Name
(RefSeq) acidic endochitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00520
Amino sugar and nucleotide sugar metabolism
sbi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
8057305
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
8057305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
8057305
NCBI-ProteinID:
XP_002461854
UniProt:
A0A921USF7
C5X3P2
LinkDB
All DBs
Position
2:complement(13354934..13355940)
Genome browser
AA seq
297 aa
AA seq
DB search
MATRSSLVPLLLIAVAAAQIVGSQAGSISIYWGQNGGEGTLADTCATGNYKFVNLAFLVA
FGNGQQPVLNLAGHCDPSSGGCTSLSDDIKSCQSNGVKVMLSIGGASGSYYLTSAADAKT
VATYLWNNFLGGQSSSRPLGDAVLDGIDFDIEGGTTQHWDDLARYLKGYSNSGRRVYLTA
APQCPFPDAYVGDALNTGQFDYVWVQFYNNPPCQYSSGSTTDLADAWKQWLSIPAKQVFL
GLPASPEAAGSGFIPADDLKSQVLPLIKSSGKYGGIMLWSKYYDDQDDYSSSVKSDV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagatcatcgctggtgccactgctgctcattgcagtagctgctgcgcagatt
gttgggtcacaagctggcagcatttccatatactggggtcagaatggtggcgagggcaca
ctggccgacacctgcgccactggcaactacaagtttgtcaacttggcattccttgtagcc
tttggcaatggccagcaaccagtgctcaacctagcaggccactgtgacccctcaagtggt
ggctgcaccagcctaagcgacgacatcaagtcgtgccagagcaatggcgtcaaggtcatg
ctctcgatcggtggagcttctggtagctactaccttacctcagccgcggatgccaagact
gttgcgacatacttgtggaacaatttcttaggggggcaatcatcttctcgccccttgggc
gatgcggtccttgatggcatagactttgacatcgagggcggcaccacccagcactgggat
gatcttgcaagatacttgaaagggtacagcaactctggcaggagggtgtacctgactgct
gcacctcagtgcccgtttcctgatgcctatgtcggtgatgctctcaacaccggccagttt
gactacgtctgggtgcagttctacaacaaccctccttgccagtacagctcaggcagcacc
actgatcttgctgatgcatggaagcagtggctatcaattccggcaaagcaggtctttctt
ggcctcccagcttcgcctgaagctgctgggagtggttttataccagctgatgacctcaag
tctcaggtgcttccattgatcaagagttcagggaaatatggagggatcatgctgtggtcc
aagtactatgatgaccaggatgactacagctcttcagtcaagagcgatgtttag
DBGET
integrated database retrieval system
