Sorghum bicolor (sorghum): 8057307
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Entry
8057307 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8057307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8057307
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8057307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
HD_5
Motif
Other DBs
NCBI-GeneID:
8057307
NCBI-ProteinID:
XP_002459726
UniProt:
A0A921UUV8
C5X481
LinkDB
All DBs
Position
2:13452907..13457485
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AA seq
437 aa
AA seq
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MFGTPSTTPVFGNPSTTPVFGTPSTTPAFGATSSTPAFGTPSSTPAFGTPSSTPAFGTAS
TTPAFGASTSAPAFGTASTSSAFGSLNFGTPSSTSAFGTPSSAPAFGALNFGTPSSTSAF
GTPSSAPAFGGTPSPSPFGFQQQQATPSPSPFGLLGGGGAQITTQMAPVAPLPLSPSDRD
IQAIVDAYKEDPGNPRYAFRHLLFSVTEPSQRVKPVAASDIMWAEAMGKLECMDSADRER
LWPQLVQGFKDLSHRLKLQDEVLVSDTDRLSMTHSNVKKLQRHFQADTYPWIQRLKQQEL
VIQRRLLRFVRIVEALENRGYRSPLTKEEADLYERLVAILKRLKGPSADLSKRVNTLLST
SRLLASTGGAGGSVYIPSSAKVDERSVTELLEALQLQTEAVAKLGNVLKRDIRDLEIIQS
EDTDMAEDSVGRRAQKI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggaccccatctaccactcccgtcttcgggaacccctccaccaccccggttttc
ggcacgccttccaccaccccggcatttggcgcgacatcgtccaccccggccttcggcacc
ccctcgtcgacgcccgccttcgggaccccgtcgtcgacgccagcgttcgggaccgcttcc
acgaccccggccttcggtgcatcgacgtcggcgccagcgttcgggaccgcttccacgagc
tcggcgttcggctcgctcaacttcgggacgccctcgtcgacctcagcattcggcacgcca
tcctcggctccggcgttcggcgcgctgaatttcgggacgccctcgtcgacctcggcattc
ggcacgccctcctcggcgccggcgttcggcggaactccttcgccctcgccctttgggttc
cagcagcagcaggcgacgccgtccccgtcgccgttcggcttgctaggaggtggcggcgcg
caaatcaccacccagatggcccccgtcgcgccgctgccgctctccccgtctgaccgcgac
atccaggccatcgttgatgcgtacaaggaggaccccggtaacccccgttatgctttcagg
catctgttgttcagcgtgacagagccttcccaaagggtgaagccagttgctgcatcagat
attatgtgggcagaagcaatggggaaacttgaatgcatggatagcgcagatagggagagg
ctctggcctcagcttgtgcagggttttaaagacctttcccatcggcttaagcttcaagac
gaagtccttgtttcagatactgatagattgagcatgactcactctaacgtcaaaaagctg
caaaggcatttccaagctgacacgtatccatggatccaacgattgaagcaacaagagctg
gttattcagagacgtcttttaaggtttgttagaatagtggaggcgttggagaatcggggt
taccgcagtcctttaacaaaggaggaagctgacttgtatgaaagattggttgctatatta
aagcggctaaaaggacctagtgctgatctgtctaagagggttaatacacttctttcgacg
tcacgtcttctagctagcactggtggtgctggtggttctgtttatattcctagttcagcc
aaagttgatgaacggagtgttacagagcttcttgaggccttacaactacaaacagaggca
gttgccaagctaggtaacgtgttgaagagggatatcagggacctcgagatcatccagtca
gaagacacggatatggctgaagacagtgtggggagaagggcacagaaaatataa
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