Sorghum bicolor (sorghum): 8057404
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Entry
8057404 CDS
T01086
Name
(RefSeq) putative aconitate hydratase, cytoplasmic
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00020
Citrate cycle (TCA cycle)
sbi00630
Glyoxylate and dicarboxylate metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi01200
Carbon metabolism
sbi01210
2-Oxocarboxylic acid metabolism
sbi01230
Biosynthesis of amino acids
Module
sbi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sbi_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
8057404
00630 Glyoxylate and dicarboxylate metabolism
8057404
Enzymes [BR:
sbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
8057404
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
8057404
NCBI-ProteinID:
XP_002465901
UniProt:
Q1KSB0
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All DBs
Position
1:78059156..78066951
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AA seq
991 aa
AA seq
DB search
MPPLTSSLLSRSTTGGSSARGVAAAAAISRPAADAAPSSSSPPARSTPTPRPRPSTASPF
ASGLAGRLFGGHRAAARSASSATAVFERRFASAATRNTYDEILTGLKRPGAGDEFGKYYS
LPALSDPRIDRLPYSIRILLESAIRNCDDFQVTGNDVEKILDWEKSAPKLVEIPFKPARV
LLQDFTGVPAVVDLACMRDAMSKLGSDPNKINPLVPVDLVIDHSVQVDVARSANAAQANM
ELEFHRNKERFGFLKWGSSAFRNMLVVPPGSGIVHQVNLEYLARVVFNNGGILYPDSVVG
TDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLKNGVTATDLVLT
VTQMLRKHGVVGKFVEFYGQGMSELSLADRATIANMSPEYGATMGFFPVDAKTLDYLKLT
GRSDDTVAMVESYLRANKMFVDHSQVEAERVYSSYLELNLEEVEPCLSGPKRPHDRVTLK
NMKSDWLSCLDSDVGFKGFAVPKESQGKVAEFSFHGTPAKIKHGDVVIAAITSCTNTSNP
NVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVKKYLDKSGLQKYLDQLGFHIVGYGC
TTCIGNSGELDESVSAAITENDVVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALA
GTVNIDFEKEPIGISKDGKEVYFRDVWPSTEEIAEVVKSSVLPDMFKSTYESITKGNPMW
NELSVSTSTLYPWDPTSTYIHEPPYFKDMTMTPPGPRPVKDAYCLLNFGDSITTDHISPA
GNIHPDSPAAKYLKERGVERKDFNSYGSRRGNDEIMARGTFANIRLVNKFLKGEVGPKTI
HVPSGEKLAVFDAAMKYKNEGHDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFER
IHRSNLAGMGIIPLCFKAGEDADTLGLTGHERYTVHLPTNVSEIKPGQDVTVTTDNGKSF
TCTLRFDTEVELAYYDHGGILPYVTRKIAEQ
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctcacgagctccctcctctcccgctccaccaccggcggctcctccgcccgc
ggcgtggcggcggccgctgcgatctccaggcccgccgcggacgccgccccttcctcctcg
tccccgcctgcccgctcgaccccgaccccgaggccgcgccccagcacggcgtcgcccttc
gcgtccggcctcgcgggccgcctcttcggcggccaccgcgccgccgcccgctccgcgtcg
tctgcgactgccgtcttcgagcgccggttcgcctcagccgcgaccaggaacacgtacgat
gaaatcctgacggggctcaagagaccaggagccggagatgagttcggcaagtactacagc
ctgcctgcgctctccgatccgcggattgatcggctcccatattctataagaattcttctc
gagtcggcaatcaggaactgcgatgacttccaggtcaccgggaacgatgttgagaagatc
ttggattgggagaaaagtgcaccgaagctagttgaaatcccattcaagcctgcccgcgtc
ctcctccaggattttactggtgtcccagctgttgttgatcttgcctgcatgagggatgcc
atgagcaaacttggcagtgatccgaacaaaattaatcctctggtacctgtcgaccttgtt
attgatcattcagtacaagtcgatgtggcaagatcagcaaatgctgctcaggcaaatatg
gagcttgagttccatcgtaacaaggaacggtttgggttcttgaaatgggggtcgtctgca
ttccgcaacatgcttgttgttccacctggatctggcattgtccaccaggtgaatcttgaa
tatctggccagggttgtgtttaacaatggtgggatcctttaccctgacagcgtcgtaggc
actgactctcacacaactatgatagatggtcttggagttgctgggtggggagttggtggc
atagaggcggaagctgcaatgcttggccagccaatgagcatggtcttgccaggtgttgtt
ggctttaagttatcaggcaagctgaagaatggagttacagccacagacttggttctaaca
gtaactcaaatgcttcggaaacatggtgttgttgggaaatttgttgagttttatgggcaa
ggcatgagtgaattgtcacttgctgatcgggcgaccattgcaaatatgtctccagaatat
ggtgcaactatgggtttcttcccagttgatgcaaagacactggactatttgaagcttact
ggccgaagtgatgatacagtggccatggttgagtcctacctgcgcgcaaataagatgttt
gttgatcacagccaggttgaagctgaaagagtatattcttcctatctagaacttaacctg
gaagaggtagaaccatgtctatcgggaccaaaacggcctcatgatcgagtgacattgaag
aatatgaagtctgattggctttcttgcttggacagcgatgtgggattcaagggttttgct
gtccccaaagaatcacagggcaaagttgcagaattttcgttccatggaactcctgcaaag
ataaaacatggtgatgttgtaattgcagcaataaccagttgcacaaacacatcaaatcct
aatgtaatgctgggagctgctttggttgccaagaaggcttgtgagttaggcctggaggta
aagccatggattaagacgagtcttgcacctggttccggtgttgtgaagaagtacttggat
aagagtggtttgcagaaatatctcgaccagcttggcttccatattgttggctatggttgc
acaacctgcattggaaattctggagagcttgatgaatccgtgtctgctgcaattactgag
aatgatgttgttgctgctgctgtattgtccggaaacaggaattttgaaggacgtgtgcat
cctttaaccagagcaaattaccttgcttcccctcctctagttgtggcttatgccttggct
ggcacggttaatattgattttgagaaagaacctattggcatctcaaaagatgggaaagag
gtttacttccgggatgtttggccatccacagaagaaatagccgaggttgtcaagtcaagt
gtgctcccagacatgttcaagagcacatatgagtccatcaccaaaggaaatcctatgtgg
aatgagctctcagtctcaacaagcactctctacccctgggatccaacatctacatacatc
catgagcctccttacttcaaggatatgacaatgactcctcctggcccgcggccagtgaag
gatgcatattgccttctgaactttggagacagtatcacaactgatcacatctcacctgcc
ggaaacattcacccagacagcccagctgcaaaatatctgaaggagcgtggtgttgaaagg
aaggacttcaactcatatggtagccgaagaggaaatgatgagatcatggctaggggaacc
tttgccaacattcgtcttgtgaataagttcttgaagggtgaggttggacccaagacaatc
catgttccatctggggagaagcttgcagtttttgatgctgctatgaaatacaagaatgaa
gggcatgacactattatcctggctggtgccgagtacgggagtggaagctctcgggattgg
gctgcaaagggcccaatgctgcagggagtgaaggctgtgatagcgaagagctttgagagg
attcaccgcagcaatcttgctggcatgggaatcatccctctatgcttcaaagcaggggag
gatgcagacaccctgggcctaaccggccatgagcgctacacagtccaccttccaaccaac
gtgagtgagataaagcctggccaagatgttactgtgacaactgataatgggaagtcattc
acttgcacactcagattcgacactgaggtggagcttgcttactacgaccatggtggtatt
ctaccatatgtcaccagaaagattgcggaacaatag
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