Sorghum bicolor (sorghum): 8057591
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Entry
8057591 CDS
T01086
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8057591
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
8057591
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
8057591
NCBI-ProteinID:
XP_002446943
UniProt:
C5YE14
A0A921UDM9
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All DBs
Position
6:53544219..53551623
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AA seq
599 aa
AA seq
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MASNSSAAAFFGVRDGDQQDQIKPLISPQQQLAAALPGVAGAVPAASGQGAPTAAAPQPP
PKKKRTMPDPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKN
PLQAQRRRVYLCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDW
KAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPTSLSSLTSHLYGATN
AGNMALSLSQVGSHLTSTLQDGHHHHPSPELLRLGAAAGGGGSSIAARLDHLLSPNGASA
FRSPQAPPSSASFFLNAGASVGQDFGDDAGNGPHSYLQANKPFHGLMQLPDLQGNGAGGP
GASGPSLFNLGFFANNGNSSGSSHEHASQGLMNNDQFSGGAGGGGGGGGSEVSAAGIFGG
NFVGGGDQVPPPGLYSDQASMLPQMSATALLQKAAQMGATSSTNGGAASMFRGFVGSSSP
HVRPATPHMEQSDANLNDLMNSLAGGGVGGGGMFGGGNGAVSAGMFDPRQLCNMAEHEVK
FGQGGGDMTRDFLGVGGGGIVRGISTPRGGGGDHQSSSDMSSLEAEMKSASSFNGGRMP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaattcatcggcggcggcgttctttggcgttagggatggggaccagcaagac
cagattaagccgctgatatcaccgcagcagcagctggcagcggcgctgcccggcgtggca
ggcgctgtgcctgcggcgtccggccaaggcgcgccgaccgcggcggcgccgcagccaccg
cccaagaagaagaggactatgcccgaccccgacgctgaggtgatcgcgctgtcgcccaag
acgctgctggcgacgaaccggttcgtgtgcgaggtgtgcaacaaggggttccagcgggag
cagaacctgcagctgcaccgtcgcgggcacaacctgccgtggaagctgaagcagaagaac
ccgctgcaggcgcagcggcggcgcgtgtacctgtgcccggagccgacgtgcgtgcaccac
gacccggcgcgcgccctcggcgacctgacggggatcaagaagcacttctgccgcaagcac
ggcgagaagaagtggaagtgcgacaagtgctccaagcgctacgccgtgcagtcggactgg
aaggcgcactccaagatctgcggcacccgcgagtaccgatgcgactgcggcacactcttc
tccaggagggacagcttcatcacgcaccgggcgttctgcgatgccctggcgcaggaaagc
gcgcggctgccgccgacgagcctcagcagcctcaccagccacctctacggcgccaccaac
gcgggcaacatggcgctcagcctctcgcaggtgggctcccacctcacctccactctccag
gacggccaccaccaccacccgtccccggagctcctccgactcggcgccgcggccggcggc
ggcggcagcagcatcgccgcgcgcctcgaccacctcctgtcgcccaacggtgcgtccgcc
ttccgctcgccgcaggctccgccgtcgtcggcgtccttcttcctcaacgcgggggcatcg
gtcgggcaggactttggggacgacgcgggcaatgggccgcactcgtacctgcaggccaac
aagcctttccatgggctcatgcagctccccgacctccaaggcaacggtgctgggggccct
ggcgcctcaggccccagcctcttcaacctgggtttctttgctaacaatggcaacagctcg
gggtccagtcacgagcatgcaagccaggggctcatgaacaacgaccagttcagtggcggg
gcaggtggaggcggtggcggcgggggctcggaggtatcggcggcggggatttttggcggc
aacttcgttggtggtggagatcaagttccaccgccggggctctacagtgatcaagcctcc
atgctgccgcagatgtcggcgaccgctctgctgcagaaggcggcgcagatgggcgcgacc
tcgagcaccaacggcggcgcggcatccatgttccgaggcttcgtgggctcttcttcccct
cacgtgcggccggcgacgccgcacatggaacagagcgacgcgaacctgaacgacctgatg
aactcgctcgctggaggtggcgtcggcggcggaggaatgttcggcggcggcaacggcgcc
gtcagcgcggggatgtttgaccccaggcagctgtgcaacatggcggagcacgaggtgaag
ttcgggcagggtggcggagacatgacacgggacttccttggcgtcggcggaggcggcatc
gtgcgcgggatatcgacgccgagaggaggaggaggagaccaccagagcagcagcgatatg
agctccctggaggccgagatgaagtcggcctcgtccttcaacggtggcaggatgccatga
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