KEGG   Sorghum bicolor (sorghum): 8057601
Entry
8057601           CDS       T01086                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03030  DNA replication
sbi03410  Base excision repair
sbi03420  Nucleotide excision repair
sbi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    8057601
   03410 Base excision repair
    8057601
   03420 Nucleotide excision repair
    8057601
   03430 Mismatch repair
    8057601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbi03032]
    8057601
   03036 Chromosome and associated proteins [BR:sbi03036]
    8057601
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8057601
DNA replication proteins [BR:sbi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    8057601
  DNA Replication Termination Factors
   ELG1-RFC complex
    8057601
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    8057601
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     8057601
  Check point factors
   HRAD17(Rad24)-RFC complex
    8057601
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Rad17 Mg_chelatase AAA_16 Viral_helicase1 RCF1-5-like_lid RuvB_N AAA_5 nSTAND3 AAA_11 AAA_19 AAA_28 AAA_25 AAA_assoc_2 AAA_30 AAA_24 MeaB RNA_helicase AAA_3 DNAX_ATPase_lid ABC_tran bpMoxR IstB_IS21 NTPase_1 SLFN-g3_helicase AAA_18 DO-GTPase1 NPHP3_N KTI12 DUF6120
Other DBs
NCBI-GeneID: 8057601
NCBI-ProteinID: XP_002446951
UniProt: C5YE32 A0A921QRG4
LinkDB
Position
6:53811824..53815697
AA seq 333 aa
MAASSAAAHADTYDIPWVEKYRPNRVADVVGNSDAVARLEVIARDGNMPNLILSGPPGTG
KTTSILALAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILD
EADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGR
LMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPL
HVKNMVKNVLDGKFDEACAALKQLYDLGYSPTDIITTLFRVVKNYDMPEYLKLEMLKETG
FAHMRICDGVGSFLQLSGLLAKFALVREIAKAP
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggccgcctcctcagccgccgcccacgccgacacctacgacatcccgtgggtggagaag
taccgccccaaccgcgtcgcagacgtcgtcggcaactccgatgccgtcgcccgcctggag
gtcattgcccgcgacggcaacatgcccaacctcatcctctccgggcctccggggaccggg
aagacgacgagcatcctggcgctggcgcacgagcttctggggcccagctaccgcgaggcc
gtgctggagctcaatgcctcagatgacaggggtttggatgtggtgcggaacaagatcaag
atgtttgcccagaagaaggtcaccctgcagccagggcggcacaaaattgtgatcttggat
gaggctgacagcatgacaacaggagcacagcaagctctgagaagaacaatggagatctat
tcaaacaccactagatttgcactagcatgcaacacctcatcgaagataattgaacccatt
caaagccgatgtgctattgtcaggttctcaaggctttctgaccaggagatccttggccgc
ctcatgattgttgtggcagctgagaaggttccttatgtgccagaggggctggaggctatc
atatttactgctgatggtgacatgagacaagctttgaacaacctgcaagctacatttagt
gggttccgctttgttaatcaagaaaatgtgttcaaggtatgtgatcaaccacatccctta
catgtcaagaacatggtgaaaaatgtgcttgatggaaagtttgatgaggcctgcgctgca
ctgaagcaactttatgatttgggatactctcctactgacattatcactactctcttccgt
gttgtgaagaattatgacatgcctgaatatctgaagctcgaaatgctgaaggaaacagga
tttgcacacatgagaatatgtgatggtgttggatcatttcttcagctttctggtctactt
gccaagtttgcgctcgtgagggaaattgcaaaagcaccatga

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