Sorghum bicolor (sorghum): 8057605
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Entry
8057605 CDS
T01086
Name
(RefSeq) branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8057605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8057605
Spliceosome [BR:
sbi03041
]
Complex A
Other components
Complex A specific factors
8057605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
RRM_5
eIF3g
PHD_4
zf-CCHC
KH_PNO1_2nd
RRM_10
DUF6319
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
8057605
NCBI-ProteinID:
XP_002448361
LinkDB
All DBs
Position
6:complement(53876009..53880606)
Genome browser
AA seq
727 aa
AA seq
DB search
MASAETLTRSPSREPSSDPPRAASSEPHHNGDGTGAGAGDSSRRRRRSRWEQSNDDSAAN
NSGGEGGTGGRKRKTRWAEEEPRPAIALPDFMKDFAAEMDPEVHALNARLLEISRLLQSG
LPLDDRPEGARSPSPEPVYDNLGIRINTREYRARERLNRERQEIISQLIRRNPTFKPPSD
YRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGKLLQ
KRDLKPDPSENEDLHVLVEADTQEALDAAAGMVEKLLTPVDEVLNEHKRQQLRELAALNG
TIRDDEFCRTCGEAGHRQYACPNKMNTFKSDVQCKICGDGGHPTIDCPVKGTSGKKMDDE
YQNFLAELGGGSAPESMNKSGGPMLALTGSGGSGGASAGTGSNPPWPWSTGGGVAATGLN
GIKKDYDETNLYIGYLPPTMDDPGLISLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDV
SQANAAIAAMNGHHLEGRVIAVRVAGKPPQPAPAVSAPPSYPPPPTDPTSGGYSSQSYMR
APPPPPPGSYAPVPWGQPPPYASYPPPPPGSSVYNPAPPAPGQAAPPPYGVQYPPPPPPP
AAPIPPPGTTPSSDGAQNYPPGVAPPSSGTPTHPVATSVYASSGAPNAPSMYPPPPYSYS
PYYPPPFQPPPPPPPVSVDPSQSIATAPWATHSAVPPPPPPLSSSTDQPTASYGADAEYD
KFMSEMK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgccgaaaccctaacccgctccccctcgcgcgagccctcctccgacccgccc
cgcgccgcctcttccgagccccaccacaacggcgacggcaccggtgcgggcgccggagac
tcgtcccgccgccgccgccgcagccgctgggagcagtccaacgatgactccgccgccaac
aactccggcggcgagggcgggaccgggggccggaagcgcaagacgcggtgggccgaggag
gagccgcgcccggccatcgcgctcccggacttcatgaaggacttcgccgccgagatggac
cccgaggtacacgccctcaacgcgcgcctcctcgagatctcgcgcttgctgcagtcaggc
ctcccgctcgacgaccgccctgagggcgcgcgctcgccctcccccgagcccgtctacgac
aacctcggcatccgcatcaacacccgcgaataccgcgccagggagcgcctcaaccgcgag
aggcaggagatcatctcgcagctcatccgccgcaaccccaccttcaagcccccctccgac
taccgcccacccaagctccagaagaagctctacatccccatgaaggagtaccccggctac
aactttatcggcctcatcattggccctcgtggcaacacgcagaagcgcatggagaaggag
actggtgccaagattgtcattagggggaagggtagtgtcaaggaagggaagctgctgcag
aagagggacctcaagccggatcccagcgagaacgaagacctccacgtgcttgttgaggca
gacacacaggaggcactggacgcggctgctggtatggtggagaagctgctcaccccggtg
gatgaggtgctcaatgagcacaagcggcagcagctccgggagcttgccgcacttaatgga
acaattagggatgatgagttttgtaggacatgtggtgaggctggccacaggcagtatgct
tgccccaacaagatgaacacgtttaagagtgatgtgcagtgcaagatctgtggggatggt
gggcacccgactattgattgtccggtcaagggcacttctgggaagaagatggacgatgaa
taccagaacttcctggctgagcttggtggtgggagtgcacctgagtccatgaacaaatct
ggtggtccaatgttggctcttacaggaagtggcggtagcggtggtgcttctgctggaact
gggagtaacccgccttggccttggtcaactggtggtggtgtggctgccactgggctcaat
ggtatcaagaaagactatgacgagacaaatctgtatattggctacctgccacctacaatg
gatgatcctggattaatcagtctgttttcgcaatttggggatattgtcatggctaaggtg
atcaaggatcgaaacacaggacagagtaaaggatatggatttgtcaagtattcagatgtg
tcacaggccaatgcagcgattgctgcaatgaatggtcaccatcttgaagggagagttatt
gcagttagagttgcaggaaagccgccacagccggcaccagcagtgtcagcacccccctcg
tatcctcctcctcctacggatcctacttcaggtggctattcctcccagtcctacatgaga
gcaccaccgccacctcctccagggagttacgctccagttccttgggggcagccaccacca
tatgcttcatatcctccgccaccaccaggctctagcgtctacaatcctgcaccccctgca
ccaggtcaagctgccccacctccatatggggtgcagtatccaccaccaccaccaccccca
gcagctccgatccctccaccaggcactactccatcaagtgatggagctcagaactatccc
cctggtgtagcaccaccaagttctggcacacccactcaccctgttgcaacatcagtatat
gcatcatcaggcgcaccaaatgcaccatcgatgtaccctccaccaccttatagttattcc
ccatactatcctccaccatttcagccaccacctccaccaccaccggttagtgttgatccc
tctcagagtattgcaactgcaccttgggctacacacagtgcagtgccgccaccgccacca
cctttgtcctcctcaaccgaccagcctactgcttcctatggtgccgatgcagagtatgac
aagtttatgtcagagatgaagtga
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